y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10007222m |
Family | CE8 |
Protein Properties | Length: 758 Molecular Weight: 84393.4 Isoelectric Point: 10.0497 |
Chromosome | Chromosome/Scaffold: 7 Start: 9750923 End: 9753567 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 447 | 742 | 0 |
NVVVAKDGSGKCKTIAQALAMVPMNNKRKFVIHIKQGVYKEKVEVSKKMLHVMFVGDGPTKTIITGDIAFLPNRVGTFRTASVAVNGDYFMAKDIGFENT AGAARHQAVALRVSADFAVFYNCHMNGYQDTLYVHTHRQFYRDCRISGTIDFVFGDAKAVFQNCVFVIRRPMDNQQCIVTAQGRKDKRETTGIVIHNSRI IGDASYRPVKAKNRAFLGRPWKEYSRTVIMNTEIDDVIDPEGWLKWNETFALNTLFYTEYRNRGRGSGQSRRVRWRGIRRLSSRAVREFSPGNFLR |
Full Sequence |
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Protein Sequence Length: 758 Download |
MKKYVLLGAT ALIIAMVICV EADDGSSPSR KIEEIHRESK LVITRTAVSI ICASTDYKED 60 CTSSLATVRT PDPRTIIRAS FDLAMLSIRS GIDRGLIDLK SKADADVHTR EALNTCRELM 120 DDAIDDLRKT RDRFRGFLFT RLPDFVEDLC VWLSGSITYQ QTCIDGFEGI DSEAAMMMEK 180 VMRKGQHLTS NGLAIASNLD SLLKAFRIPI PFLGSRRGRL GILGSSRDEP SDSSQDPPSD 240 VDSSENSSEP IDSSENRPSD SSQNKTLDSS NNRLTNSSNN RPLESSQTSP QQSTSSQSRP 300 TASSEKLPQN STSSGNQPLT SSEIPSQKLI STGNRPAVSS EKLPQNSTSS GNQPLSSSEI 360 PSQKSTYTGN QPLGPPQNSD SSVTRPFDPL QKLNPPIGKL DSLNDRHLSE EEEFPPWVTL 420 HSRRLLARRI RRRPKKGMRA SKGIRANVVV AKDGSGKCKT IAQALAMVPM NNKRKFVIHI 480 KQGVYKEKVE VSKKMLHVMF VGDGPTKTII TGDIAFLPNR VGTFRTASVA VNGDYFMAKD 540 IGFENTAGAA RHQAVALRVS ADFAVFYNCH MNGYQDTLYV HTHRQFYRDC RISGTIDFVF 600 GDAKAVFQNC VFVIRRPMDN QQCIVTAQGR KDKRETTGIV IHNSRIIGDA SYRPVKAKNR 660 AFLGRPWKEY SRTVIMNTEI DDVIDPEGWL KWNETFALNT LFYTEYRNRG RGSGQSRRVR 720 WRGIRRLSSR AVREFSPGNF LRGNTWIPQT RIPYNAN* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02217 | PLN02217 | 1.0e-25 | 2 | 209 | 213 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 5.0e-45 | 2 | 208 | 213 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02217 | PLN02217 | 5.0e-121 | 399 | 754 | 356 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 4.0e-153 | 398 | 757 | 360 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 5.0e-177 | 447 | 744 | 299 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_193333.1 | 0 | 1 | 757 | 1 | 701 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_199729.1 | 2e-36 | 46 | 208 | 53 | 217 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_199729.1 | 0 | 398 | 757 | 222 | 569 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002314364.1 | 1e-27 | 33 | 217 | 45 | 227 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314364.1 | 0 | 390 | 756 | 215 | 566 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 447 | 755 | 8 | 316 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 444 | 754 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 3e-29 | 447 | 748 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 3e-29 | 447 | 748 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 5e-29 | 447 | 748 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |