CAZyme Information

Basic Information
SpeciesCapsella rubella
Cazyme IDCarubv10007540m
FamilyGT13
Protein PropertiesLength: 434 Molecular Weight: 50186.5 Isoelectric Point: 8.2466
ChromosomeChromosome/Scaffold: 7 Start: 61413 End: 64508
Descriptionalpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT13224250
  IQMRLFQTQSQYADRLGSAIESENHCTSQMRGLIDEVSIKQSRIVALEDMKNRQDQELVQLKDLIQTFERKGIAKLTEGGQMPVAAVVIMACSRADYLER
  TVKSVLKYQSLVASKYPLFISQDGSDQGVKSKALSYNQLTYMQHLDFEPVITERPGELIAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDY
  FEAAASLMNRDKTIMAASSWNDNGQKQFVHDPYALYRSDFFPGLGWMLKRSTWDELSPKLKENHKGRQFIRPEVCRTYNFGEHGSSLGQFYSQYLEPIKL
  NDVKVDWKAKDLGYLTEGNYTKYFSGLVRQARPIQGSDLVLKAQNIESDILIRYKDQAEFERIAGEFGIFEEWKDGVPRTAYKGVVVFRIQTTRRVFLVG
  PDSI
Full Sequence
Protein Sequence     Length: 434     Download
MARISCDFRF LLIPAAFMFI YIQMRLFQTQ SQYADRLGSA IESENHCTSQ MRGLIDEVSI    60
KQSRIVALED MKNRQDQELV QLKDLIQTFE RKGIAKLTEG GQMPVAAVVI MACSRADYLE    120
RTVKSVLKYQ SLVASKYPLF ISQDGSDQGV KSKALSYNQL TYMQHLDFEP VITERPGELI    180
AYYKIARHYK WALDQLFYKH KFSRVIILED DMEIAPDFFD YFEAAASLMN RDKTIMAASS    240
WNDNGQKQFV HDPYALYRSD FFPGLGWMLK RSTWDELSPK LKENHKGRQF IRPEVCRTYN    300
FGEHGSSLGQ FYSQYLEPIK LNDVKVDWKA KDLGYLTEGN YTKYFSGLVR QARPIQGSDL    360
VLKAQNIESD ILIRYKDQAE FERIAGEFGI FEEWKDGVPR TAYKGVVVFR IQTTRRVFLV    420
GPDSIMQLGI RDL* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00761Glyco_tranf_GTA_type0.006108242135+
cd02514GT13_GLCNAC-TI1.0e-165105424336+
pfam03071GNT-I013432437+
Gene Ontology
GO TermDescription
GO:0000139Golgi membrane
GO:0003827alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
GO:0006487protein N-linked glycosylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAB37480.1014301454glycosyltransferase like protein (fragment) [Arabidopsis thaliana]
EMBLCAB37564.1014321456glycosyltransferase like protein [Arabidopsis thaliana]
EMBLCAC80700.1014321443N-acetylglucosaminyltransferase I [Arabidopsis thaliana]
EMBLCBI29533.1014301438unnamed protein product [Vitis vinifera]
RefSeqNP_195537.2014321443CGL1 (COMPLEX GLYCAN LESS 1); alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase/ protein N-acetylglucosaminyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1foa_A01024245339A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I
PDB1fo9_A01024245339A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I
PDB1fo8_A01034241334A Chain A, Crystal Structure Of N-Acetylglucosaminyltransferase I
PDB2apc_A01054242333A Chain A, Crystal Structure Of N-Acetylglucosaminyltransferase I
PDB2am5_A01054242333A Chain A, Crystal Structure Of N-Acetylglucosaminyltransferase I
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EX035232286363100
BX83986232813170
EX08595126712670
GR45178526012600
EX139924252262770
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_007_00911.3Aquca_007_00911.4Aquca_007_00911.2Aquca_007_00911.1Aquca_007_00911.5
Arabidopsis lyrata912565490588
Arabidopsis thalianaAT4G38240.1AT4G38240.2AT4G38240.3
Brachypodium distachyonBradi3g60820.3Bradi3g60820.1Bradi3g60820.2
Brassica rapaBra033557
Carica papayaevm.TU.contig_28580.1.22.235evm.TU.contig_28580.1.235.387evm.TU.contig_28580.1.235.387evm.TU.contig_28580.1.22.235
Citrus clementinaCiclev10028418m
Citrus sinensisorange1.1g019888morange1.1g012912morange1.1g012941m
Cucumis sativusCucsa.099720.1Cucsa.099720.2
Eucalyptus grandisEucgr.L00584.1Eucgr.L00583.1Eucgr.H04987.1Eucgr.H04987.2Eucgr.H04989.3
Eucgr.H04989.2Eucgr.H04989.4Eucgr.H04989.1
Fragaria vescamrna17328.1-v1.0-hybrid
Glycine maxGlyma04g00200.1Glyma06g00230.1
Gossypium raimondiiGorai.008G014000.2Gorai.008G014000.3Gorai.008G014000.1
Linum usitatissimumLus10022994Lus10001389
Malus domesticaMDP0000173465.283.435MDP0000170967.230.351MDP0000170967.22.209MDP0000170967.22.209MDP0000173465.283.435
MDP0000173465.22.268MDP0000173465.22.268MDP0000170967.230.351
Manihot esculentacassava4.1_024783m
Medicago truncatulaMedtr3g118520.1Medtr3g118520.2Medtr3g118520.3
Mimulus guttatusmgv1a006517mmgv1a006750m
Oryza sativaLOC_Os02g58590.1.304.426LOC_Os02g58590.1.304.426LOC_Os02g58590.1.22.283LOC_Os02g58590.1.22.283
Panicum virgatumPavirv00053907mPavirv00020030m
Physcomitrella patensPp1s100_54V6.1Pp1s246_61V6.1
Phaseolus vulgarisPhvul.009G115600.1
Picea abiesMA_901813g0010
Populus trichocarpaPotri.009G168000.2Potri.009G168000.1Potri.009G168000.4Potri.004G206900.3Potri.004G206900.1
Potri.004G206900.2Potri.009G168000.3
Prunus persicappa006221m
Ricinus communis29675.m000398.22.23129675.m000398.232.34829675.m000398.232.34829675.m000398.22.231
Setaria italicaSi006441mSi006440m
Selaginella moellendorffii268301
Sorghum bicolorSb08g003660.1
Thellungiella halophilaThhalv10025211mThhalv10025208mThhalv10025250m
Vitis viniferaGSVIVT01002028001GSVIVT01002907001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny