Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10007859m |
Family | CE8 |
Protein Properties | Length: 330 Molecular Weight: 36626.1 Isoelectric Point: 9.1113 |
Chromosome | Chromosome/Scaffold: 7 Start: 13525817 End: 13529996 |
Description | methylesterase PCR A |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 34 | 317 | 0 |
FIVAKDGTGHFTTVNGAVAAAPENSMKRFVIYVKRRVYREVVRVGVKKSNITIIGDGQDLTILTGNLNSDDTKSFDTATLGVDGFGFIAQDLCIQNTAGP QKGPAVALRISAERVVVYRCKIDAFQDSLYAYSGRQFYRECHITGTVDFICGHATAVFQYCQIEARKPAKQQNNSGFSFQRCNITAGSDLRLTNGTVKMY LGRPWRAFSRVVFMECLLDKIIDPAGWLPWDVKDLVTLTTLYYGEYRNTGPGADTSKRVNWKGYKRIIDMSEAASFTVEKLIQG |
Full Sequence |
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Protein Sequence Length: 330 Download |
MGSFTKMQLL SLIFLLVAPA LSLDQVPKDK GADFIVAKDG TGHFTTVNGA VAAAPENSMK 60 RFVIYVKRRV YREVVRVGVK KSNITIIGDG QDLTILTGNL NSDDTKSFDT ATLGVDGFGF 120 IAQDLCIQNT AGPQKGPAVA LRISAERVVV YRCKIDAFQD SLYAYSGRQF YRECHITGTV 180 DFICGHATAV FQYCQIEARK PAKQQNNSGF SFQRCNITAG SDLRLTNGTV KMYLGRPWRA 240 FSRVVFMECL LDKIIDPAGW LPWDVKDLVT LTTLYYGEYR NTGPGADTSK RVNWKGYKRI 300 IDMSEAASFT VEKLIQGNLW INSTGVPYEL |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 6.0e-102 | 32 | 328 | 311 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 2.0e-102 | 32 | 330 | 313 | + pectinesterase | ||
PLN02488 | PLN02488 | 2.0e-127 | 30 | 329 | 314 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 7.0e-129 | 23 | 328 | 320 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 3.0e-138 | 33 | 318 | 300 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF16649.1 | 0 | 24 | 323 | 37 | 320 | AC011661_27 T23J18.3 [Arabidopsis thaliana] |
RefSeq | NP_172624.1 | 0 | 32 | 329 | 245 | 554 | PMEPCRA (METHYLESTERASE PCR A); enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_172625.3 | 0 | 11 | 329 | 193 | 521 | pectin methylesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_189437.1 | 0 | 32 | 329 | 187 | 494 | pectinesterase family protein [Arabidopsis thaliana] |
Swiss-Prot | Q1JPL7 | 0 | 32 | 329 | 245 | 554 | PME18_ARATH RecName: Full=Pectinesterase/pectinesterase inhibitor 18; AltName: Full=AtPMEpcrA; Contains: RecName: Full=Pectinesterase inhibitor 18; AltName: Full=Pectin methylesterase inhibitor 18; Contains: RecName: Full=Bifunctional pectinesterase 18/rRNA N-glycosylase; Short=PE 18; AltName: Full=Ribosome-inactivating protein; AltName: Full=Pectin methylesterase 18; AltName: Full=Pectin methylesterase 4; Short=AtPME4; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 32 | 328 | 3 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 31 | 330 | 6 | 317 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 5e-21 | 44 | 315 | 18 | 334 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 5e-21 | 44 | 315 | 18 | 334 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 5e-21 | 44 | 315 | 18 | 334 | A Chain A, Pectin Methylesterase From Carrot |