Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10008131m |
Family | CBM45 |
Protein Properties | Length: 1170 Molecular Weight: 131149 Isoelectric Point: 6.3988 |
Chromosome | Chromosome/Scaffold: 1 Start: 3677004 End: 3684700 |
Description | Pyruvate phosphate dikinase, PEP/pyruvate binding domain |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM45 | 113 | 188 | 2.6e-24 |
LHWGAIRDNKEKWVLPSRSPDRTINHKNRALRTPFVKSGANSCLKLEIDDRAIHAIEFLIFDESRNKWYKNNGQNF |
Full Sequence |
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Protein Sequence Length: 1170 Download |
MSNSVVHNLL NRGLIRPVSF DHQHKLYSSS LPALSPPLRS KLYGKALKKT GQSLTTETGR 60 SLSFVPRAVL AMDPQAAEKF TLDGNIDLLV EVTSASVREV NIQIAHTSDS LLLHWGAIRD 120 NKEKWVLPSR SPDRTINHKN RALRTPFVKS GANSCLKLEI DDRAIHAIEF LIFDESRNKW 180 YKNNGQNFRI NLPTERKLEH NVSVPEDLVQ IQAYLRWERN GKQMYNPEKE KEEYEAARTE 240 LQEEMMRGAS VEDLRAKLSQ KDNTNESPKS NDTSSSGRET QKKASKQPER KKYYSTEKIQ 300 RKGRDLNKLI CKHVADSVEP NSKSSTEPRS LTTLEIYAKA KEEQETTPVF SKKTFKLEGS 360 AILVLVTKIS GKTKIHLATD FKEPVTLHWA LSQKGGEWLD PPSDKLPPNS LPVRGAVDTK 420 LTITSTDLPS PVQTFELEIE GDSYKGMPFV LNAGERWIKN NDSDFYVDFA KEEKHVQKDY 480 GDGKGTAKHL LDRIADLESE AQKSFMHRFN IAADLVDEAK NAGQLGFAGI LVWMRFMATR 540 QLVWNKNYNV KPREISQAQD RLTDVLQDVY ASSPEYRELL RMIMSTVGRG GEGDVGQRIR 600 DEILVVQRKN DCKGGMMEEW HQKLHNNTSP DDVVICQALM DFVKSDFDMS VYWKTLNDNG 660 ITKERLLSYD RGIHSEPSFR REQKDGLLRD LGHYMRTLKA VHSGADLESA IQNCMGYQDD 720 GEGFMVGVQI NPVSGLPSGY PDLLRFVLEH VEEKNVEPLL EGLLEARQEL RPLLLKSHDR 780 LKDLLFLDLA LDSTVRTAIE RGYEQLNDAG PEKIMYFISL VLENLALSSD DNEDLIYCLK 840 GWQHALGMYK SKKDHWALYA KSVLDRSRLA LASKAERYLE ILQPSAEYLG SCLGVEQWAV 900 TIFTEEIIRA GSAAALSSLV NRLDPVLRQT ANLGSWQVIS PVEVVGYVIV VDELLTVQNK 960 TYDRPTIIVA NRVRGEEEIP DGAVAVLTPD MPDVLSHVSV RARNGKICFA TCFDSGILSD 1020 LQGKDGKLLS LQPTSADVVY KEVNDSELSS LSSDNIEDAP PSISLVKKEF AGRYAISSEE 1080 FTSDLVGAKS RNIGYLKGKV PSWVGIPTSV ALPFGVFEKV ISDKANETVN EKLLVLKKTL 1140 DGGDQGALKE IRETLLGLVA PAELLKFPL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02784 | PLN02784 | 3.0e-5 | 286 | 519 | 263 | + alpha-amylase | ||
PLN02784 | PLN02784 | 2.0e-5 | 111 | 194 | 86 | + alpha-amylase | ||
PLN02784 | PLN02784 | 1.0e-5 | 53 | 284 | 246 | + alpha-amylase | ||
PLN02784 | PLN02784 | 2.0e-8 | 277 | 504 | 242 | + alpha-amylase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD31337.1 | 0 | 1 | 1166 | 1 | 1132 | AC007354_10 Strong similarity to gb |
GenBank | AAF17665.1 | 0 | 40 | 1166 | 160 | 1302 | AC009398_14 F20B24.19 [Arabidopsis thaliana] |
RefSeq | NP_563877.1 | 0 | 1 | 1166 | 1 | 1173 | SEX1 (STARCH EXCESS 1); alpha-glucan, water dikinase [Arabidopsis thaliana] |
RefSeq | XP_002315679.1 | 0 | 11 | 1166 | 16 | 1251 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527902.1 | 0 | 1 | 1166 | 1 | 1243 | alpha-glucan water dikinase, chloroplast precursor, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777523 | 671 | 498 | 1166 | 0 |
HO794398 | 525 | 644 | 1166 | 0 |
HO794398 | 142 | 503 | 644 | 0 |
DY667394 | 305 | 569 | 873 | 0 |
FD976522 | 265 | 548 | 812 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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