| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10008221m |
| Family | GH116 |
| Protein Properties | Length: 953 Molecular Weight: 106510 Isoelectric Point: 6.8402 |
| Chromosome | Chromosome/Scaffold: 1 Start: 11833613 End: 11838545 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 525 | 886 | 0 |
| GQFLYLEGTQYLMYNTYDVHFYSSFALLMLFPKLELSIQRDFAAAVLMHDSSRKQVMSSGEFVTRKVLGAVPHDIGLNDPWFEVNAYNLFNTNRWKDLNS KFVLQVYRDVVATGDLNFAKAVWPSVYTAIAYLDQFDKDGDGMIENEGFPDQTYDAWSCSGVSAYCGGLWVAALQAGSALAREIGDNGAAVYFNAKYEKA RSVYEKLWNGSYFNYDNSKSGSSSSILADQMAGQWYARACGLKPIAKEEWIKKALETVYDFNVMKVKEGTRGAVNGMLPDGRVDTSTMVSREVWAGTTYS VAACMIQEGLSDKGFKTASGIYEAAWSDRGLGCSFQTPEAWTTNDEYRSLCYMRPLAIWGIQ | |||
| Full Sequence |
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| Protein Sequence Length: 953 Download |
| FIIPKMQNVS EDQNQMVTND KLPPFSWERK LNSQAKTPSE FKLSKRDHLH LFPLGYRLWR 60 HTKEEAAKGR ASIFDIFRKH HITGDHGVPL GGIGAGSIGR SYKGEFQQFK LFPKVCEEAP 120 ILTNQFSAFV SRPGGVKHST VLCPTKPQVI KDNGGYLCKG QAPNIGIESW DWNMTGEKST 180 YHALYPRSWT VYDGEPDPEL RIVSRQVSPF IPHNYEESSL PVSVFNFTVT NTGAEQAIVT 240 LLFTWENSVG GASGLTGQHF NSTMKAKDGV HAVALQHKTA NGHPPVSYAI AAKETEDVRV 300 SSCPCFIVSG TTPNKITAGD MWDEIKKNAS FDKLTSNACF PSKPGTSIGA AIAAKVKVPP 360 GCDRTVTFSL SWDCPEARFD EKTYHRRYTR FYGSLGNAAV AMAHDALLNF SEWETQIEEW 420 QAPILSDTTL PEWYRVTLFN ELYYFNSGGT MWTDGLPPKQ SLDSIGRRKI SLSISTIDNT 480 DPDQNNIALD ILGRIDAVCS QIHAPFSSNA ALGTSMIQNS VENIGQFLYL EGTQYLMYNT 540 YDVHFYSSFA LLMLFPKLEL SIQRDFAAAV LMHDSSRKQV MSSGEFVTRK VLGAVPHDIG 600 LNDPWFEVNA YNLFNTNRWK DLNSKFVLQV YRDVVATGDL NFAKAVWPSV YTAIAYLDQF 660 DKDGDGMIEN EGFPDQTYDA WSCSGVSAYC GGLWVAALQA GSALAREIGD NGAAVYFNAK 720 YEKARSVYEK LWNGSYFNYD NSKSGSSSSI LADQMAGQWY ARACGLKPIA KEEWIKKALE 780 TVYDFNVMKV KEGTRGAVNG MLPDGRVDTS TMVSREVWAG TTYSVAACMI QEGLSDKGFK 840 TASGIYEAAW SDRGLGCSFQ TPEAWTTNDE YRSLCYMRPL AIWGIQWAHT MPQPKREQEQ 900 SLRPQEEEET SVLFQQHAGF IKVAHYLKNT KGKDHRNRLQ TTYETFLRLI RL* 960 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.0004 | 593 | 741 | 163 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 1.0e-31 | 85 | 454 | 393 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 6.0e-66 | 87 | 413 | 340 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 2.0e-72 | 524 | 885 | 381 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 7.0e-174 | 525 | 887 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF97289.1 | 0 | 128 | 952 | 23 | 790 | AC010164_11 Hypothetical protein [Arabidopsis thaliana] |
| GenBank | AAM19831.1 | 0 | 10 | 952 | 9 | 922 | AT4g10060/T5L19_190 [Arabidopsis thaliana] |
| GenBank | AAO42222.1 | 0 | 6 | 952 | 1 | 947 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_174631.2 | 0 | 6 | 952 | 1 | 947 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | NP_192744.6 | 0 | 10 | 952 | 9 | 922 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY292040 | 365 | 538 | 899 | 0 |
| JG703027 | 328 | 543 | 870 | 0 |
| FC917648 | 306 | 538 | 843 | 0 |
| FC895322 | 303 | 402 | 700 | 0 |
| DY268096 | 310 | 436 | 741 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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