| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10008281m |
| Family | GT20 |
| Protein Properties | Length: 868 Molecular Weight: 98730 Isoelectric Point: 6.2391 |
| Chromosome | Chromosome/Scaffold: 1 Start: 8394422 End: 8398269 |
| Description | trehalose-phosphatase/synthase 9 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT20 | 53 | 546 | 0 |
| SSNSSHERKIIVANMLPLQAKRDTETGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGASEQDEVSQKLLLDFNCVPTFLPKEMQEKFYLGFCKH HLWPLFHYMLPMFPDHGDRFDRRLWQAYVSANKIFSDRVMEVINPEEDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDDLLRGL LNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGIDDMDIFKGISLK LIAMEHLFETYWHMRGKLVLIQIVNPARASGKDVEEAKRETYSTAKRINERYGSVGYQPVILIDRLVPRYEKTAYYAMADCCLVNAVRDGMNLVPYKYII CRQGTPGMDKAMGISHDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKSFMQDLER | |||
| Full Sequence |
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| Protein Sequence Length: 868 Download |
| MVSRSCANFL DLASWDLLNF PQTQRALPRV MTVPGIISEL DGDYGDGSSD VNSSNSSHER 60 KIIVANMLPL QAKRDTETGQ WCFSWDEDSL LLQLRDGFSS DTEFVYIGSL NADIGASEQD 120 EVSQKLLLDF NCVPTFLPKE MQEKFYLGFC KHHLWPLFHY MLPMFPDHGD RFDRRLWQAY 180 VSANKIFSDR VMEVINPEED YVWIQDYHLM VLPTFLRKRF NRIKLGFFLH SPFPSSEIYR 240 TLPVRDDLLR GLLNCDLIGF HTFDYARHFL SCCSRMLGLD YESKRGHIGL DYFGRTVYIK 300 ILPVGIHMGR LESVLNLPST AAKMKEIQEQ FKGKKLILGI DDMDIFKGIS LKLIAMEHLF 360 ETYWHMRGKL VLIQIVNPAR ASGKDVEEAK RETYSTAKRI NERYGSVGYQ PVILIDRLVP 420 RYEKTAYYAM ADCCLVNAVR DGMNLVPYKY IICRQGTPGM DKAMGISHDS PRTSMLVVSE 480 FIGCSPSLSG AIRVNPWDVD AVAEAVNLAL TMGETEKRLR HEKHYHYVST HDVGYWAKSF 540 MQDLERACRE HYNKRCWGIG FGLSFRVLSL SPSFRKLSID HIVSTYRTTE RRAIFLDYDG 600 TLVPESSIIK TPNAEVLSVL KSLCRDPKNT VFVVSGRGWE SLSDWLSPCE NLGIAAEHGY 660 FIRWSSKKEW ETCYSSADAE WKTMVEPVMR SYMDATDGST IEYKESALVW HHQDADPDFG 720 SCQAKELLDH LESVLANEPV VVKRGQHIVE VKPQGVSKGL AVEKVIHRMV EDGNPPDMVM 780 CIGDDRSDED MFESILSTVT NPDLPMPPEI FACTVGRKPS KAKYFLDDVS DVLKLLRGLA 840 AASSSSKPEY QQESSSMHTQ VAFESII* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03063 | PLN03063 | 9.0e-169 | 60 | 839 | 819 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
| PLN02205 | PLN02205 | 0 | 1 | 849 | 854 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
| pfam00982 | Glyco_transf_20 | 0 | 59 | 546 | 492 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
| PRK14501 | PRK14501 | 0 | 60 | 839 | 788 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
| cd03788 | GT1_TPS | 0 | 62 | 545 | 484 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005992 | trehalose biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC18810.1 | 0 | 31 | 867 | 1 | 826 | Strong similarity to trehalose-6-phosphate synthase homolog from A. thaliana chromosome 4 contig gb |
| GenBank | AAV65494.1 | 0 | 1 | 865 | 1 | 859 | trehalose 6-phosphate synthase [Gossypium hirsutum] |
| RefSeq | NP_173799.1 | 0 | 1 | 867 | 1 | 867 | ATTPS9; transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] |
| RefSeq | NP_177186.2 | 0 | 1 | 867 | 1 | 856 | ATTPS8; alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] |
| RefSeq | XP_002521023.1 | 0 | 1 | 867 | 1 | 861 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uqu_B | 0 | 143 | 546 | 74 | 453 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| PDB | 1uqu_A | 0 | 143 | 546 | 74 | 453 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| PDB | 1uqt_B | 0 | 143 | 546 | 74 | 453 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| PDB | 1uqt_A | 0 | 143 | 546 | 74 | 453 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| PDB | 2wtx_D | 0 | 143 | 546 | 74 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO777775 | 763 | 81 | 839 | 0 |
| HO779327 | 514 | 99 | 612 | 0 |
| HO779327 | 259 | 610 | 868 | 0 |
| HO797286 | 463 | 377 | 839 | 0 |
| HO777775 | 78 | 1 | 77 | 0.004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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