| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10008402m |
| Family | GT66 |
| Protein Properties | Length: 740 Molecular Weight: 83380 Isoelectric Point: 9.1561 |
| Chromosome | Chromosome/Scaffold: 1 Start: 11978625 End: 11982032 |
| Description | staurosporin and temperature sensitive 3-like b |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT66 | 45 | 689 | 0 |
| LRISILGLVYILAFIARLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWFDSESWYPLGRIIGGTLYPGLMVTAALIYWALRFLRFFVHIREVCV LTAPFFASNTTLVAYFFGKEIWDTGAGLVAAVLIAICPGYISRSVAGSYDNEAVAIFALLLTFYLFVKAVNTGSLAWALGSAFGYFYMVSAWGGYVFIIN LVPLYVLVLLITGRYSMRLYIAYNCMYILGMLLAMQIRFVGFQHVQSGEHMGAMGVFLLMQVFYFLDWVKYQLNDTKLFQTFLRITVTSAILVGGIALGV GTASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDYHILLFLFPAGLYFCFKRLSDATIFIVMYGLTSLYFAGVMVRLILVATPAVCL ISAIAVSATVKNLTSLLRTKQKVSQTGSTKGAGSSKASSKVTLDQSQPFQKNGAIALLVGVFYLLSRYAIHCTWVTSEAYSSPSIVLAARGAHGNRIIFD DYREAYYWLRQNTPTDAKIMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYDIMRSLDVNYVLVVFGGVTGYSSDDINKFLWMVRIG GGVFPVIKEPDYLVNGEFRVDKGASPKMLNCLMYKLCYYRFGELT | |||
| Full Sequence |
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| Protein Sequence Length: 740 Download |
| MGGKTEPAKS ESMATATTRS PDLINSSFFS FKSLKLKTKQ QELLLRISIL GLVYILAFIA 60 RLFSVLRYES MIHEFDPYFN YRTTLFLTEK GFYEFWNWFD SESWYPLGRI IGGTLYPGLM 120 VTAALIYWAL RFLRFFVHIR EVCVLTAPFF ASNTTLVAYF FGKEIWDTGA GLVAAVLIAI 180 CPGYISRSVA GSYDNEAVAI FALLLTFYLF VKAVNTGSLA WALGSAFGYF YMVSAWGGYV 240 FIINLVPLYV LVLLITGRYS MRLYIAYNCM YILGMLLAMQ IRFVGFQHVQ SGEHMGAMGV 300 FLLMQVFYFL DWVKYQLNDT KLFQTFLRIT VTSAILVGGI ALGVGTASGY ISPWTGRFYS 360 LLDPTYAKDH IPIIASVSEH QPTAWSSFMF DYHILLFLFP AGLYFCFKRL SDATIFIVMY 420 GLTSLYFAGV MVRLILVATP AVCLISAIAV SATVKNLTSL LRTKQKVSQT GSTKGAGSSK 480 ASSKVTLDQS QPFQKNGAIA LLVGVFYLLS RYAIHCTWVT SEAYSSPSIV LAARGAHGNR 540 IIFDDYREAY YWLRQNTPTD AKIMSWWDYG YQITAMGNRT VIVDNNTWNN THIATVGRAM 600 SSYEDEAYDI MRSLDVNYVL VVFGGVTGYS SDDINKFLWM VRIGGGVFPV IKEPDYLVNG 660 EFRVDKGASP KMLNCLMYKL CYYRFGELTT EYGKPPGYDR ARGVEIGNKD IKLEHLEEAY 720 TTSNWIVRIY RVKPPTNRL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02366 | PMT | 0.0008 | 149 | 288 | 154 | + Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is the Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). | ||
| pfam13231 | PMT_2 | 6.0e-5 | 125 | 266 | 148 | + Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366. | ||
| TIGR04154 | archaeo_STT3 | 2.0e-33 | 47 | 621 | 637 | + oligosaccharyl transferase, archaeosortase A system-associated. Members of this protein family occur, one to three members per genome, in the same species of Euryarchaeota as contain the predicted protein-sorting enzyme archaeosortase (TIGR04125) and its cognate protein-sorting signal PGF-CTERM (TIGR04126). | ||
| COG1287 | COG1287 | 1.0e-71 | 46 | 737 | 728 | + Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only] | ||
| pfam02516 | STT3 | 7.0e-149 | 46 | 690 | 662 | + Oligosaccharyl transferase STT3 subunit. This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004576 | oligosaccharyl transferase activity |
| GO:0006486 | protein glycosylation |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_174675.2 | 0 | 1 | 739 | 1 | 735 | STT3B (staurosporin and temperature sensitive 3-like b); oligosaccharyl transferase [Arabidopsis thaliana] |
| RefSeq | XP_002269119.1 | 0 | 9 | 738 | 8 | 736 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002318345.1 | 0 | 40 | 738 | 22 | 720 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329687.1 | 0 | 4 | 738 | 5 | 720 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514508.1 | 0 | 10 | 677 | 5 | 669 | oligosaccharyl transferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2lgz_A | 0 | 515 | 733 | 20 | 238 | A Chain A, Solution Structure Of Stt3p |
| PDB | 3vu0_C | 0.00005 | 545 | 661 | 6 | 123 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vu0_B | 0.00005 | 545 | 661 | 6 | 123 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vu0_A | 0.00005 | 545 | 661 | 6 | 123 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vgp_A | 0.0007 | 544 | 645 | 6 | 113 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
