Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10008424m |
Family | GH35 |
Protein Properties | Length: 734 Molecular Weight: 81554.9 Isoelectric Point: 8.7364 |
Chromosome | Chromosome/Scaffold: 1 Start: 15501975 End: 15506210 |
Description | beta-galactosidase 5 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 40 | 341 | 0 |
IVNGHRRILLSGSIHYPRSTPEMWEDLIKKAKDGGLDVIDTYVFWNGHEPSPGTYNFKGRYDLVRFIKTIQEVGLYVHLRIGPYVCAEWNFGGFPVWLKY VDGISFRTDNGPFKAAMQGFTEKIVQMMKEHRFFASQGGPIILSQIENEFGPELKALGPAGHSYVNWAAKMAVGLNTGIPWVMCKEDDAPDPIINACNGF YCDYFAPNKPYKPTMWTEAWSGWFTEFGGTIPKRPVEDLAFGVARFIQKGGSYINYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLVQEPKYSHLKQ LH |
Full Sequence |
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Protein Sequence Length: 734 Download |
MGTTTILVLT KILSFLLTTM LLGSSLIQCT SVTYDKKAII VNGHRRILLS GSIHYPRSTP 60 EMWEDLIKKA KDGGLDVIDT YVFWNGHEPS PGTYNFKGRY DLVRFIKTIQ EVGLYVHLRI 120 GPYVCAEWNF GGFPVWLKYV DGISFRTDNG PFKAAMQGFT EKIVQMMKEH RFFASQGGPI 180 ILSQIENEFG PELKALGPAG HSYVNWAAKM AVGLNTGIPW VMCKEDDAPD PIINACNGFY 240 CDYFAPNKPY KPTMWTEAWS GWFTEFGGTI PKRPVEDLAF GVARFIQKGG SYINYYMYHG 300 GTNFGRTAGG PFITTSYDYD APIDEYGLVQ EPKYSHLKQL HLAIKQCEAA LVSSDPHVTK 360 LGNYEEAHVF TTGKGSCVAF LTNYHMNAPA KVVFNKRHYT LPAWSISILP DCRNVVYNTA 420 TVAAKTSHVQ MVPSGSILYS VARYDENIAT YGDRGTITAR GLLEQVNVTR DTTDYLWYTT 480 SVDIKASESF LRGGKWPTLT VDSAGHAVHV FVNGHFYGSA FGTRENRKLS FSAQVNLRGG 540 ANRIALLSVA VGLPNVGPHF ETWATGIVGS VALHGLDEGN KDLSWQKWTY QAGLQGEAMN 600 LISPTEESSV DWIKGSLAKQ NKQPLTWYKA YFDTPRGNEP LALDLKSMGK GQAWINGQSL 660 GRYWMAYAKG NCGTCHYAGT YRQNKCQSGC GEPTQRWYHV PRSWLKPRGN LLVLFEELGG 720 DVSKVSVVKR SVN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam13364 | BetaGal_dom4_5 | 0.006 | 473 | 519 | 47 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
pfam02449 | Glyco_hydro_42 | 7.0e-7 | 54 | 190 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 2.0e-21 | 32 | 335 | 365 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-163 | 38 | 344 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 12 | 721 | 713 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL24206.1 | 0 | 4 | 733 | 3 | 732 | At1g45130/F27F5_20 [Arabidopsis thaliana] |
EMBL | CAB64741.1 | 0 | 4 | 733 | 3 | 732 | putative beta-galactosidase [Arabidopsis thaliana] |
RefSeq | NP_175127.1 | 0 | 4 | 733 | 3 | 732 | BGAL5 (beta-galactosidase 5); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002306893.1 | 0 | 1 | 732 | 1 | 727 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510455.1 | 0 | 9 | 732 | 6 | 727 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 36 | 340 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 6e-39 | 31 | 414 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 6e-39 | 31 | 414 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |