CAZyme Information

Basic Information
SpeciesCapsella rubella
Cazyme IDCarubv10008447m
FamilyGH63
Protein PropertiesLength: 718 Molecular Weight: 82614.2 Isoelectric Point: 5.2024
ChromosomeChromosome/Scaffold: 1 Start: 9288652 End: 9293703
DescriptionSix-hairpin glycosidases superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH634597129.7e-30
  PNEDERHVDLRCWMYLAADCMNSIQEFMGKKETLVTEDYSSISKLLSDFTLLNQMHYDHDHGAYLDFGNHTEDVRLIWKEVTGEDGRLSREFVRETFGKP
  EPRLVPHIGYVSFFPFMFRIIPADSTILDKQLDLISNRSIVWSDYGLLSLAKTSSLYMKYNTEDEAPYWRGAIWMNMNYMILSSLHHYSKVDGPYSSKAR
  TIYEELRINLIRNVVRNYNQTGYIWEHYDQTKGTGEGARVFTGWSALILLIMSE
Full Sequence
Protein Sequence     Length: 718     Download
MWLVTKDGKH VMRHFCENSG DLKSFGWREH NGRDFGRQEL FEQDMVLETS FVKSKEGSLG    60
YGGDWSTRIN VQNMLNDEVE RTVHLFFYLA DEGGNGLNLG KDVLGLKRSS VLASGSRQDV    120
GNWQMHLKSQ NQLETHYCGF KTPDIVNLSD LVQQNLVVQE GKSERLQLSD TSEDSSNIYV    180
FQISTTTQST IDIAFISGIR EETSNTENRI MSLTGSPLSS LLEEKHIAFD AKFKECFNLS    240
EKLDLETFVV GKAAIGNMLG GIGYFYGQSK IHAPRSTLAK SEDDFLLYWP AELYTAVPSR    300
PVFPRGFLWD EGFHQLLIWR WDVQITLEIV GNWLDLMNID GWIPREQILG DEALSKIPKQ    360
YVLQLPSNGN PPTLLLVIRD LIDGIRAEKF NKAERDEILS FLDRAFVRLD AWFKWFNTSQ    420
IGKENGSYYW HGRDNITNRQ LNPQSLSSGL DDYPRASHPN EDERHVDLRC WMYLAADCMN    480
SIQEFMGKKE TLVTEDYSSI SKLLSDFTLL NQMHYDHDHG AYLDFGNHTE DVRLIWKEVT    540
GEDGRLSREF VRETFGKPEP RLVPHIGYVS FFPFMFRIIP ADSTILDKQL DLISNRSIVW    600
SDYGLLSLAK TSSLYMKYNT EDEAPYWRGA IWMNMNYMIL SSLHHYSKVD GPYSSKARTI    660
YEELRINLIR NVVRNYNQTG YIWEHYDQTK GTGEGARVFT GWSALILLIM SEEYPLF*      720
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam03200Glyco_hydro_6301714739+
Gene Ontology
GO TermDescription
GO:0004573mannosyl-oligosaccharide glucosidase activity
GO:0009311oligosaccharide metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAL17718.101717135852alpha-glucosidase I [Arabidopsis thaliana]
DDBJBAC43508.101717135852putative alpha-glucosidase I [Arabidopsis thaliana]
EMBLCAC34725.101717135852alpha-glucosidase 1 [Arabidopsis thaliana]
RefSeqNP_173842.20171772789alpha-glucosidase, putative [Arabidopsis thaliana]
RefSeqNP_176916.201717135852GCS1 (GLUCOSIDASE 1); alpha-glucosidase [Arabidopsis thaliana]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB4j5t_A0171043800A Chain A, Crystal Structure Of Processing Alpha-glucosidase I
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EX1381352893596470
HO7969613453707140
HO4731793693577130
HO4731792251373590
HE6428763273897150
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_011_00191.2Aquca_011_00191.1
Arabidopsis lyrata890241475845
Arabidopsis thalianaAT1G24320.1AT1G67490.2AT1G67490.1
Brachypodium distachyonBradi2g59037.1
Brassica rapaBra030029Bra004085
Capsella rubellaCarubv10008307mCarubv10019760m
Chlamydomonas reinhardtiig14243.t1
Citrus clementinaCiclev10030695m
Cucumis sativusCucsa.075600.1
Eucalyptus grandisEucgr.B03480.1
Glycine maxGlyma05g27900.1Glyma05g27890.1Glyma08g10871.1
Gossypium raimondiiGorai.002G191800.1Gorai.002G191800.2
Linum usitatissimumLus10037009Lus10015796
Malus domesticaMDP0000212622MDP0000266476MDP0000137967
Mimulus guttatusmgv1a001315m
Oryza sativaLOC_Os01g69210.1
Panicum virgatumPavirv00037238m
Physcomitrella patensPp1s11_175V6.1
Phaseolus vulgarisPhvul.002G174900.1Phvul.002G174800.1
Populus trichocarpaPotri.010G059000.1
Prunus persicappa001358m
Ricinus communis29929.m004669
Setaria italicaSi000266m
Selaginella moellendorffii165919
Sorghum bicolorSb03g044090.1
Thellungiella halophilaThhalv10006835mThhalv10018104m
Vitis viniferaGSVIVT01010441001
Volvox carteriVocar20009518m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny