| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10008510m |
| Family | GT31 |
| Protein Properties | Length: 671 Molecular Weight: 76037.9 Isoelectric Point: 7.023 |
| Chromosome | Chromosome/Scaffold: 1 Start: 8549259 End: 8552006 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT31 | 437 | 618 | 0 |
| ERMAVRKSWMQQKLVRSSKVVARFFVALHSRKEVNVDLKKEAEYFGDIVIVPYMDHYDLVVLKTVAICEYGVNTVAAKYVMKCDDDTFVRVDAVIQEAEN VKGRESLYIGNINFYHKPLRTGKWAVTYEEWPEEYYPPYANGPGYILSYDIAKFIVDDFEQKRLRLFKMEDVSMGMWVEKFN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 671 Download |
| MKKSKLDNSV SQSRFGLVQF LLALLLFYFL CMSFEIPFIF RTGSVSGSDD DVSSSSFLDA 60 LPRHMVVSGG SREANLVVGE EDQGGGRDPG RVNPVGRVSE RRMREFKSVS DIFVNESFFE 120 NGGFSDEFSI FHKTAKHAIS MGKQMWDGLD SGVIKPDEAP VTTRIEKCPD NVTVTGSEFV 180 NRSRILVLPC GLTLGSHITV VATPHWAHVE KSGDKTAMVT QFMMELQGLK AVDGEDPPRI 240 LHFNPRIKGD WSGKPVIEQN TCYRMQWGTS LRCDGRESSD EDESVDGEVK CEKWKRDDDG 300 GNGDGSDESK KTWWLNRLMG RRKKMIAHDW PFPFAEGKLF VLTLRAGMEG YHISVNGRHI 360 TSFPYRTGFV LEDATGLAVK GNIDVHSVYA ASLPSTNPSF APQKHLEMQS IWKAPSLPEK 420 PVELFIGILS AGNHFAERMA VRKSWMQQKL VRSSKVVARF FVALHSRKEV NVDLKKEAEY 480 FGDIVIVPYM DHYDLVVLKT VAICEYGVNT VAAKYVMKCD DDTFVRVDAV IQEAENVKGR 540 ESLYIGNINF YHKPLRTGKW AVTYEEWPEE YYPPYANGPG YILSYDIAKF IVDDFEQKRL 600 RLFKMEDVSM GMWVEKFNET RPVAVVHSLK FCQFGCIEDY FTAHYQSPRQ MICMWDKLQR 660 LGKPHCCNMR * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00337 | Gal-bind_lectin | 5.0e-10 | 186 | 273 | 88 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| cd00070 | GLECT | 2.0e-13 | 332 | 388 | 57 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam00337 | Gal-bind_lectin | 3.0e-14 | 329 | 388 | 60 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| pfam01762 | Galactosyl_T | 3.0e-20 | 436 | 616 | 198 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03133 | PLN03133 | 7.0e-115 | 166 | 670 | 517 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF79857.1 | 0 | 1 | 670 | 1 | 657 | AC000348_10 T7N9.18 [Arabidopsis thaliana] |
| DDBJ | BAC42872.1 | 0 | 1 | 670 | 1 | 673 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_174032.2 | 0 | 1 | 670 | 1 | 673 | galactosyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002268603.1 | 0 | 97 | 670 | 96 | 670 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002520170.1 | 0 | 22 | 670 | 1 | 638 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1x50_A | 0.002 | 315 | 388 | 87 | 156 | A Chain A, Solution Structure Of The C-Terminal Gal-Bind Lectin Domain From Human Galectin-4 |
