| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10008578m |
| Family | CBM57 |
| Protein Properties | Length: 627 Molecular Weight: 68258.7 Isoelectric Point: 8.5201 |
| Chromosome | Chromosome/Scaffold: 1 Start: 9733086 End: 9737047 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 209 | 360 | 4.7e-26 |
| DEDYSGDHWGGDRFWNPRRSFGKGADSPRSTENTIKKASVSPNFYPEALYQSALVSTEDQPDLTYSLDVEPNRKYSVWLHFAEIDATITAEGKRVFDVVI NGDTLFEDVDIIKRSGDRYAALVLNATVTVSGRTLTVVLQPKAGGLAIINAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 627 Download |
| MLRFILPCLL IIFSFGLPSS SARPAPYALR ISCGARRNVR TPPTYALWFK DIAYTGGIPA 60 NATSPSYITP PLKTLRYFPI SEGPNNCYNI VRVPKGHYSV RIFFGVVDQP NFDKEPLFDI 120 SIEGTQISSL KSGWSSQDDQ VFAEALMFLL GGTATICFHS TGHGDPAILS IEILQVDDKA 180 YNFGEGWGQG VILRTATRLT CGTGKPRFDE DYSGDHWGGD RFWNPRRSFG KGADSPRSTE 240 NTIKKASVSP NFYPEALYQS ALVSTEDQPD LTYSLDVEPN RKYSVWLHFA EIDATITAEG 300 KRVFDVVING DTLFEDVDII KRSGDRYAAL VLNATVTVSG RTLTVVLQPK AGGLAIINAI 360 EVFEVITAEF KTLRDEVGAL QKMKKALGLP SRFGWNGDPC VPPQHPWSGA NCQLDKNTSR 420 WFIDGLDLDN QGLKGFLPND ISKLKHLQSI NLSENSIRGG IPASLGSVTS LEVLDLSYNS 480 FNGSIPETLG ELTSLRILNL NGNSLSGKVP AAVGGRLLHR ASFNFTDNAG LCGIPGLPAC 540 GPHLSSGAKI GIAFGVSLAF LLIVACAMIW WKRRQNILRA QQIAARGAPY AKKRTHVSHD 600 IQMSRQGHNN HGQARTAVEN GPSLLS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 8.0e-15 | 426 | 537 | 112 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 8.0e-15 | 423 | 577 | 184 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 4.0e-15 | 426 | 515 | 90 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam12819 | Malectin_like | 1.0e-66 | 31 | 365 | 351 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 1 | 626 | 626 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF16758.1 | 0 | 22 | 624 | 22 | 624 | AC010155_11 F3M18.23 [Arabidopsis thaliana] |
| EMBL | CBI30598.1 | 0 | 25 | 626 | 23 | 624 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_174156.1 | 0 | 22 | 626 | 22 | 626 | AtRLP4 (Receptor Like Protein 4); protein binding [Arabidopsis thaliana] |
| RefSeq | XP_002305781.1 | 0 | 29 | 626 | 1 | 596 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509445.1 | 0 | 1 | 626 | 1 | 629 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 0.000000000000002 | 398 | 547 | 611 | 755 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 3rgz_A | 0.0000000006 | 423 | 513 | 468 | 558 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 3rgz_A | 0.000000006 | 412 | 513 | 389 | 486 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 3rgz_A | 0.00000001 | 433 | 514 | 454 | 535 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 3rgz_A | 0.001 | 440 | 510 | 195 | 264 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
