| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10008589m |
| Family | GH47 |
| Protein Properties | Length: 624 Molecular Weight: 69000 Isoelectric Point: 7.1311 |
| Chromosome | Chromosome/Scaffold: 1 Start: 10290853 End: 10294382 |
| Description | alpha-mannosidase 3 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH47 | 135 | 620 | 0 |
| AFDHAWSGYRKYAMGYDELMPISQKGVDGLGGLGATVVDALDTAMIMGLDNVVSEAGSWVETHLLERISQKGQVNLFETTIRVLGGLLSAYHLSGGEQGT MNMTHNGPKPAIYLNIAKDLADRLLSAFTSSPTPVPFCDVILHESTAHPAPGGASSTAEVASVQLEFNYLSAISGDPKYSTEAMKVLAHIKTLPKTEGLV PIYISSQTGEFVGENIRLGSRGDSYYEYLIKVWLQQGTKVNSNFTYLHDMYIEAMKGVRHLLVRNSIPKGLVFVGELPYGSKGEFSPKMDHLVCFLPGTL ALGATKGLTKEQALKENLLSFEDLENLKLAEDLAKTCFEMYEVTATGLAPEIAYFHTAEYSEDGLEGGNKSSVYANDIIIKHADRHNLLRPETVESLFVL YRITKDTKYRDQGWQIFEAFEKYTKVKSGGYTSLDDVTEVPPHRRDKMETFFLGETLKYLYLLFGDDSVIPLDKFVFNTEAHPLPI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 624 Download |
| MSKSLPYSVK DIHYDNAKFR HRSPLKVLSQ SLLTLNTKRN YASCSTGKFL ILILVFGLVC 60 LMLMSKSPNE SALNEKGKVT FVGGLRLGRL LRKPPRLPPR LSPDEGQLRG SSTNGSTISI 120 SDPKWAARQQ SVKDAFDHAW SGYRKYAMGY DELMPISQKG VDGLGGLGAT VVDALDTAMI 180 MGLDNVVSEA GSWVETHLLE RISQKGQVNL FETTIRVLGG LLSAYHLSGG EQGTMNMTHN 240 GPKPAIYLNI AKDLADRLLS AFTSSPTPVP FCDVILHEST AHPAPGGASS TAEVASVQLE 300 FNYLSAISGD PKYSTEAMKV LAHIKTLPKT EGLVPIYISS QTGEFVGENI RLGSRGDSYY 360 EYLIKVWLQQ GTKVNSNFTY LHDMYIEAMK GVRHLLVRNS IPKGLVFVGE LPYGSKGEFS 420 PKMDHLVCFL PGTLALGATK GLTKEQALKE NLLSFEDLEN LKLAEDLAKT CFEMYEVTAT 480 GLAPEIAYFH TAEYSEDGLE GGNKSSVYAN DIIIKHADRH NLLRPETVES LFVLYRITKD 540 TKYRDQGWQI FEAFEKYTKV KSGGYTSLDD VTEVPPHRRD KMETFFLGET LKYLYLLFGD 600 DSVIPLDKFV FNTEAHPLPI RNT* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00470 | PTZ00470 | 1.0e-170 | 128 | 623 | 502 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 0 | 135 | 620 | 489 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG52061.1 | 0 | 64 | 621 | 1 | 558 | AC022455_15 endoplasmic reticulum alpha-mannosidase, putative; 33510-31408 [Arabidopsis thaliana] |
| RefSeq | NP_564345.1 | 0 | 1 | 621 | 1 | 621 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
| RefSeq | XP_002275664.1 | 0 | 1 | 621 | 1 | 633 | PREDICTED: similar to glycoside hydrolase family 47 protein [Vitis vinifera] |
| RefSeq | XP_002306001.1 | 0 | 1 | 623 | 1 | 631 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519694.1 | 0 | 1 | 623 | 1 | 622 | endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1fo3_A | 0 | 128 | 620 | 10 | 456 | A Chain A, Crystal Structure Of Human Pofut2 |
| PDB | 1fo2_A | 0 | 128 | 620 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1fmi_A | 0 | 128 | 620 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1x9d_A | 0 | 97 | 620 | 60 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 1dl2_A | 0 | 129 | 620 | 6 | 494 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
