Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10008680m |
Family | CE8 |
Protein Properties | Length: 583 Molecular Weight: 64192.6 Isoelectric Point: 9.32 |
Chromosome | Chromosome/Scaffold: 1 Start: 8215731 End: 8217913 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 279 | 567 | 0 |
LVVAKDGSGHYTSIQQAVNAAATLPRRNKRLVIYVKAGVYRENVVIKKSIKNVMVIGDGIDSTIVTGNKNVKDGTTTFRSATFAVSGDGFIARGITFENT AGAEKHQAVALRSGSDFSVFYGCSFKGYQDTLYLHSRRQFLRNCNIHGTVDFIFGDATAILQNCNIYALKPMSGQKNTITAQSRKDPNENTGFVVHGSTV ATASETYLGRPWKSYSRTVFMKCNLGGLVNQAGWLPWNGEFALSTLYYGEYGNTGAGASVSGRVKWPGYHVIKTATEAGKFTVENFLDG |
Full Sequence |
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Protein Sequence Length: 583 Download |
MHLYITLCFP EKAISPNLSS SKLVKKSLIG TSQMDHKLLL TSPKCIITII YVLSISHLNA 60 HFITSCKQTP YPSVCAHHMS NSPLEVKTLD DQTDGLTFHD LVVSSTMDQA VQLHRLVSTV 120 KQRSSLHKHA TSALHDCLEL YEDTIDQLNH TRSSYAQYSS MHDRQTSLSA AIANQDTCKN 180 GFKDFNLTSS YSKFFPIHIH RNLTKSLSNS LAVTKAAAEA IAEKYPSTGF TEFNKQRNIG 240 RDGGHRRLLM SSDEKYPSWF PLTDRKLLED TETTTKADLV VAKDGSGHYT SIQQAVNAAA 300 TLPRRNKRLV IYVKAGVYRE NVVIKKSIKN VMVIGDGIDS TIVTGNKNVK DGTTTFRSAT 360 FAVSGDGFIA RGITFENTAG AEKHQAVALR SGSDFSVFYG CSFKGYQDTL YLHSRRQFLR 420 NCNIHGTVDF IFGDATAILQ NCNIYALKPM SGQKNTITAQ SRKDPNENTG FVVHGSTVAT 480 ASETYLGRPW KSYSRTVFMK CNLGGLVNQA GWLPWNGEFA LSTLYYGEYG NTGAGASVSG 540 RVKWPGYHVI KTATEAGKFT VENFLDGNYW ITAAGVPVND GL* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN02916 | PLN02916 | 3.0e-155 | 123 | 582 | 483 | + pectinesterase family protein |
PLN02301 | PLN02301 | 1.0e-155 | 36 | 582 | 585 | + pectinesterase/pectinesterase inhibitor |
PLN02314 | PLN02314 | 1.0e-155 | 64 | 582 | 540 | + pectinesterase |
PLN02713 | PLN02713 | 3.0e-166 | 64 | 582 | 541 | + Probable pectinesterase/pectinesterase inhibitor |
pfam01095 | Pectinesterase | 0 | 278 | 568 | 301 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN77092.1 | 0 | 37 | 582 | 3 | 507 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_173733.1 | 0 | 34 | 582 | 1 | 554 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002314796.1 | 0 | 34 | 582 | 1 | 531 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002320714.1 | 0 | 66 | 582 | 32 | 514 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527782.1 | 0 | 44 | 582 | 3 | 529 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 273 | 582 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 277 | 582 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-19 | 275 | 539 | 2 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-19 | 275 | 539 | 2 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-19 | 275 | 539 | 2 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778758 | 485 | 118 | 582 | 0 |
EC939603 | 286 | 307 | 583 | 0 |
DY923593 | 279 | 287 | 559 | 0 |
CD820002 | 215 | 247 | 461 | 0 |
EE076581 | 280 | 276 | 546 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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