| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10008683m |
| Family | AA1 |
| Protein Properties | Length: 583 Molecular Weight: 65591.6 Isoelectric Point: 9.0237 |
| Chromosome | Chromosome/Scaffold: 1 Start: 6257634 End: 6260182 |
| Description | laccase 1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 27 | 576 | 0 |
| TTRRFHFNVEWKKVTRLCHTKQLLTVNGQYPGPTVAVHEGDTVEIKVTNRIAHNTTIHWHGLRQYRTGWADGPAYITQCPIRSKQAYTYRFKVEDQRGTL LWHAHHSWQRASVYGAFIIYPRKPYPFPGSYNIQSEIPIILGEWWNGDVDQVEKNMIMTGNGANVSDAYTLNGLPGPLYPCSTKDTFTANVDPGRTYILR IINAALNSELFFAVSNHTLTVVEVDAVYTKPVDTQAIMIAPGQTTTLLLRTNQLPGGEFLIAATPYVTSVFPFNNSTTVGFIRYRGKTKPENTENTQRRR RLTAMSTAADLPKMLDTKFATRFSDNIKSLGSEEYPCKVPRKIDKRVITTISLNLQDCPQNQTCGGYAGKRYSASMNNISFVRPPVSILESYYKKQSKGV FSLDFPEKPPNRFDFTGVDPVSENMNTEFGTKLFEVEFGTRLEIVFQGTSFLNIENHPLHVHGHNFFVVGRGFGNFDPEKDPKRYNLVDPPERNTYAVPT GGWAAIRINADNPGVWFIHCHLEQHTSWGLAMGFIVKDGPLPSQTLLPPP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 583 Download |
| MENSGFLMIS TFLLLFATLL PHSSASTTRR FHFNVEWKKV TRLCHTKQLL TVNGQYPGPT 60 VAVHEGDTVE IKVTNRIAHN TTIHWHGLRQ YRTGWADGPA YITQCPIRSK QAYTYRFKVE 120 DQRGTLLWHA HHSWQRASVY GAFIIYPRKP YPFPGSYNIQ SEIPIILGEW WNGDVDQVEK 180 NMIMTGNGAN VSDAYTLNGL PGPLYPCSTK DTFTANVDPG RTYILRIINA ALNSELFFAV 240 SNHTLTVVEV DAVYTKPVDT QAIMIAPGQT TTLLLRTNQL PGGEFLIAAT PYVTSVFPFN 300 NSTTVGFIRY RGKTKPENTE NTQRRRRLTA MSTAADLPKM LDTKFATRFS DNIKSLGSEE 360 YPCKVPRKID KRVITTISLN LQDCPQNQTC GGYAGKRYSA SMNNISFVRP PVSILESYYK 420 KQSKGVFSLD FPEKPPNRFD FTGVDPVSEN MNTEFGTKLF EVEFGTRLEI VFQGTSFLNI 480 ENHPLHVHGH NFFVVGRGFG NFDPEKDPKR YNLVDPPERN TYAVPTGGWA AIRINADNPG 540 VWFIHCHLEQ HTSWGLAMGF IVKDGPLPSQ TLLPPPHDLP KC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 2.0e-52 | 34 | 150 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 1.0e-63 | 8 | 572 | 603 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 5.0e-67 | 11 | 569 | 588 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 8.0e-77 | 28 | 572 | 576 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 28 | 582 | 557 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF78389.1 | 0 | 35 | 582 | 30 | 576 | AC069551_22 T10O22.11 [Arabidopsis thaliana] |
| RefSeq | NP_173252.2 | 0 | 1 | 582 | 1 | 581 | LAC1 (Laccase 1); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002281603.1 | 0 | 2 | 582 | 7 | 583 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002317883.1 | 0 | 2 | 582 | 6 | 579 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002322091.1 | 0 | 21 | 582 | 23 | 579 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 26 | 572 | 1 | 536 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 1asq_A | 0 | 26 | 572 | 1 | 536 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 1asp_B | 0 | 26 | 572 | 1 | 536 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 1asp_A | 0 | 26 | 572 | 1 | 536 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 1aso_B | 0 | 26 | 572 | 1 | 536 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
