CAZyme Information

Basic Information
SpeciesCapsella rubella
Cazyme IDCarubv10008736m
FamilyGT68
Protein PropertiesLength: 560 Molecular Weight: 63407.4 Isoelectric Point: 7.8628
ChromosomeChromosome/Scaffold: 1 Start: 18915817 End: 18918300
DescriptionO-fucosyltransferase family protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT682355370
  KRVLVIPSHSFDYHYSRIIDIDRINTCLGRNVVVSFEEFWKKDKNRKKHHHVHINRFICYFSKPEPCYVDKEHIAKLKALGVTIGGKLDSPWEEDIAKPS
  NKTAEEVETNFRSDNDVIAIGDVFYANVEREWVMQPGGPVAHKCKTLIEPNRLILLTAQRFIQTFLGKNYISLHFRRHGFLKFCNAKNPSCFYPIPQAAN
  CITRLIEKVKAPVLYLSTDAAESETGLLQSLLILNGKTVPLVKRPARDSAEKWDALLYRHGLEGDSQVEAMLDKTICAMSSVFIGASGSTFTEDILRLRK
  DWG
Full Sequence
Protein Sequence     Length: 560     Download
MVKESSSSSS SSPDEEADIN DLLEESDTQI DQYRGIDAAA EQRPTFDVES LRSRIRRSLK    60
LNLTKKQSIV IFLPIVIILI YLSTDFSNYF SVEVPNSVFR SNTLTGRSHE SDLQALYLLR    120
KQESDLFSIW NHTLSNSSTI EDVKSAVFRQ VSLNRQIQNA LLSPHKSGNV ELGGSSDGFF    180
AGGSCRKIDQ KLNGRRTIQW KPRPDKFLFA ICLSGQMSNH LICLEKHMFF AALLKRVLVI    240
PSHSFDYHYS RIIDIDRINT CLGRNVVVSF EEFWKKDKNR KKHHHVHINR FICYFSKPEP    300
CYVDKEHIAK LKALGVTIGG KLDSPWEEDI AKPSNKTAEE VETNFRSDND VIAIGDVFYA    360
NVEREWVMQP GGPVAHKCKT LIEPNRLILL TAQRFIQTFL GKNYISLHFR RHGFLKFCNA    420
KNPSCFYPIP QAANCITRLI EKVKAPVLYL STDAAESETG LLQSLLILNG KTVPLVKRPA    480
RDSAEKWDAL LYRHGLEGDS QVEAMLDKTI CAMSSVFIGA SGSTFTEDIL RLRKDWGTAS    540
ECDEYLCAKE QPNFVADHE* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd11548NodZ_like0.008379534156+
cd11296O-FucT_like0.000520724842+
pfam10250O-FucT3.0e-6230526323+
cd11298O-FucT-28.0e-9400526127+
cd11296O-FucT_like8.0e-18374533170+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
DDBJBAF00786.101455918563hypothetical protein [Arabidopsis thaliana]
RefSeqNP_173170.20115594564unknown protein [Arabidopsis thaliana]
RefSeqNP_175780.101455918563unknown protein [Arabidopsis thaliana]
RefSeqNP_199853.10115594566unknown protein [Arabidopsis thaliana]
RefSeqXP_002264087.10125595559PREDICTED: hypothetical protein [Vitis vinifera]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB4ap6_D0.003400526277383A Chain A, Crystal Structure Of Human Pofut2 E54a Mutant In Complex With Gdp- Fucose
PDB4ap6_C0.003400526277383A Chain A, Crystal Structure Of Human Pofut2 E54a Mutant In Complex With Gdp- Fucose
PDB4ap6_B0.003400526277383A Chain A, Crystal Structure Of Human Pofut2 E54a Mutant In Complex With Gdp- Fucose
PDB4ap6_A0.003400526277383A Chain A, Crystal Structure Of Human Pofut2 E54a Mutant In Complex With Gdp- Fucose
PDB4ap5_B0.003400526263369A Chain A, Crystal Structure Of Human Pofut2
Transmembrane Domains
StartEnd
6890
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
ES8502683461945370
GO8818723602025580
EX1285553011974970
CO0852392932515420
CO0817712812635420
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_013_00900.1Aquca_013_00900.2
Arabidopsis lyrata918074889130474511
Arabidopsis thalianaAT5G50420.1AT1G17270.1AT1G53770.2AT1G53770.1
Brachypodium distachyonBradi1g23980.1
Brassica rapaBra039691Bra016609Bra022515
Carica papayaevm.model.supercontig_25.202
Capsella rubellaCarubv10026161mCarubv10008696m
Citrus clementinaCiclev10025289m
Citrus sinensisorange1.1g008526m
Cucumis sativusCucsa.088930.1Cucsa.149140.2Cucsa.088930.2Cucsa.149140.1
Eucalyptus grandisEucgr.J02587.1Eucgr.I02168.1
Fragaria vescamrna05486.1-v1.0-hybrid
Glycine maxGlyma16g01730.1Glyma07g05200.1
Gossypium raimondiiGorai.010G172800.1Gorai.006G090800.1Gorai.011G054400.1
Linum usitatissimumLus10037461Lus10003929
Malus domesticaMDP0000692823MDP0000881647MDP0000203531
Manihot esculentacassava4.1_004684m
Medicago truncatulaMedtr8g023490.1
Mimulus guttatusmgv1a003863m
Oryza sativaLOC_Os07g38490.1
Panicum virgatumPavirv00005372mPavirv00007596m
Physcomitrella patensPp1s149_19V6.1
Phaseolus vulgarisPhvul.010G122400.1Phvul.009G261000.1
Picea abiesMA_10437033g0010
Populus trichocarpaPotri.003G073500.5Potri.003G073500.1Potri.003G073500.2Potri.003G073500.3Potri.003G073500.4
Potri.003G073500.6
Prunus persicappa004150m
Ricinus communis29884.m000188
Setaria italicaSi029376m
Selaginella moellendorffii146424410382
Sorghum bicolorSb02g037060.1
Thellungiella halophilaThhalv10013133mThhalv10007186mThhalv10011359m
Vitis viniferaGSVIVT01016658001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny