| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10008737m |
| Family | GH47 |
| Protein Properties | Length: 560 Molecular Weight: 63554.3 Isoelectric Point: 6.411 |
| Chromosome | Chromosome/Scaffold: 1 Start: 17869260 End: 17874554 |
| Description | alpha-mannosidase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH47 | 103 | 535 | 0 |
| AMIHAWSSYEKYAWGKDELQPRTKDGTDSFGGLGATMIDSLDTLYIMGLDEQFQKARDWVASSLDFDKDYDASMFETTIRVVGGLLSAYDLSGDKMFLEK AKDIADRLLPAWNTPTGIPYNIINLRSGNAHNPSWAAGGDSILADSGTEQLEFIALSQRTGDPKYQQKVEKVITELNKNFPADGLLPIYINPDNANPSYS TTTFGAMGDSFYEYLLKVWVQGNKTSAVKPYRDMWEKSMKGLLSLIKKSTPSSFTYICEKNGNNLIDKMDELACFAPGMLALGASGYGPDEEKKFLSLAG ELAWTCYNFYQSTPTKLAGENYFFTAGQDMSVGTSWNILRPETVESLFYLWRLTGNKTYQEWGWNIFEAFEKNSRVESGYVGLKDVNSGAKDNKMQSFFL AETLKYLYLLFSPSSVISLDEWVFNTEAHPLKI | |||
| Full Sequence |
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| Protein Sequence Length: 560 Download |
| MARSRSISGY GLWKYLNPAY YLRRPRRLAL LFIIFVSVSM VVWDRINLTR EHEVEVYKLN 60 EEVLRLEQML EELKGVGNKP LKTMKNAPED PVDIQRRQKV KEAMIHAWSS YEKYAWGKDE 120 LQPRTKDGTD SFGGLGATMI DSLDTLYIMG LDEQFQKARD WVASSLDFDK DYDASMFETT 180 IRVVGGLLSA YDLSGDKMFL EKAKDIADRL LPAWNTPTGI PYNIINLRSG NAHNPSWAAG 240 GDSILADSGT EQLEFIALSQ RTGDPKYQQK VEKVITELNK NFPADGLLPI YINPDNANPS 300 YSTTTFGAMG DSFYEYLLKV WVQGNKTSAV KPYRDMWEKS MKGLLSLIKK STPSSFTYIC 360 EKNGNNLIDK MDELACFAPG MLALGASGYG PDEEKKFLSL AGELAWTCYN FYQSTPTKLA 420 GENYFFTAGQ DMSVGTSWNI LRPETVESLF YLWRLTGNKT YQEWGWNIFE AFEKNSRVES 480 GYVGLKDVNS GAKDNKMQSF FLAETLKYLY LLFSPSSVIS LDEWVFNTEA HPLKIVERSD 540 PRKPTIALRQ RRFGHQVKG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01532 | Glyco_hydro_47 | 0 | 103 | 535 | 452 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| PTZ00470 | PTZ00470 | 0 | 93 | 535 | 454 | + glycoside hydrolase family 47 protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK92711.1 | 0 | 1 | 558 | 1 | 571 | putative mannosidase [Arabidopsis thaliana] |
| DDBJ | BAB01459.1 | 0 | 1 | 558 | 1 | 580 | alpha 1,2-mannosidase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_001031171.1 | 0 | 104 | 557 | 1 | 454 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
| RefSeq | NP_175570.1 | 0 | 1 | 557 | 1 | 558 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
| RefSeq | NP_566675.1 | 0 | 1 | 558 | 1 | 571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nxc_A | 0 | 80 | 536 | 4 | 466 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 1fmi_A | 0 | 89 | 535 | 2 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo3_A | 0 | 89 | 535 | 2 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo2_A | 0 | 89 | 535 | 2 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1x9d_A | 0 | 91 | 535 | 82 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
