Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10008769m |
Family | CE8 |
Protein Properties | Length: 548 Molecular Weight: 60370.8 Isoelectric Point: 8.5104 |
Chromosome | Chromosome/Scaffold: 1 Start: 3981385 End: 3983584 |
Description | methylesterase PCR A |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 236 | 532 | 0 |
NVVVAKDGSGKYKTVNEAVAAAPENSNSRYVIYVKKGVYKETIDIGKKKKNLMLVGDGKDATIITGSLNVVDGSTTFRSATIAANGDGFMAQDLWIQNTA GPAKHQAVALRVSADQTVINRCRIDAYQDTLYTHTLRQFYRDSYITGTVDFIFGNSAVVFQNCDIVARKPGAGQKNMVTAQGREDQNQNTAISIQKCKIT ASSDLAPVKGSVQTFLGRPWKLYSRTVIMQSFIDNHINPAGWFPWDGEFALSTLYYGEYANTGPGADTSKRVTWKGFKVIRDAKEAEQFTVAKLIQG |
Full Sequence |
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Protein Sequence Length: 548 Download |
MSNSNQPLLS KPKSLKHKNL CLVLSFAAIL GSAAFFSAQL IYTSDDSLLT PSQICNGAHD 60 QDSCQVLLSE FTTLSLSKLN RLDLLHVFLK NSVSRVDSAM SMVKEARTRL NGARDEAGLA 120 DCEEMMDVSR DRMVSSVEEL RGGNLNLESY SNVHTWLSSV LTNYMTCLDT TNEPRVKAQL 180 EDLVSRARVA LAIFVSVLPA RDDLKMILFD HFPSWLTTLD RELLESAPKA LKVNANVVVA 240 KDGSGKYKTV NEAVAAAPEN SNSRYVIYVK KGVYKETIDI GKKKKNLMLV GDGKDATIIT 300 GSLNVVDGST TFRSATIAAN GDGFMAQDLW IQNTAGPAKH QAVALRVSAD QTVINRCRID 360 AYQDTLYTHT LRQFYRDSYI TGTVDFIFGN SAVVFQNCDI VARKPGAGQK NMVTAQGRED 420 QNQNTAISIQ KCKITASSDL APVKGSVQTF LGRPWKLYSR TVIMQSFIDN HINPAGWFPW 480 DGEFALSTLY YGEYANTGPG ADTSKRVTWK GFKVIRDAKE AEQFTVAKLI QGGLWLKPTG 540 VTYQEWL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 6.0e-158 | 117 | 544 | 438 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 9.0e-159 | 114 | 543 | 451 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 0 | 1 | 547 | 554 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 242 | 532 | 291 | + Pectinesterase. | ||
PLN02488 | PLN02488 | 0 | 54 | 547 | 509 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAD29733.1 | 0 | 43 | 547 | 43 | 554 | pectin methylesterase [Sesbania rostrata] |
RefSeq | NP_172624.1 | 0 | 1 | 547 | 1 | 557 | PMEPCRA (METHYLESTERASE PCR A); enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
Swiss-Prot | Q1JPL7 | 0 | 1 | 547 | 1 | 557 | PME18_ARATH RecName: Full=Pectinesterase/pectinesterase inhibitor 18; AltName: Full=AtPMEpcrA; Contains: RecName: Full=Pectinesterase inhibitor 18; AltName: Full=Pectin methylesterase inhibitor 18; Contains: RecName: Full=Bifunctional pectinesterase 18/rRNA N-glycosylase; Short=PE 18; AltName: Full=Ribosome-inactivating protein; AltName: Full=Pectin methylesterase 18; AltName: Full=Pectin methylesterase 4; Short=AtPME4; Flags: Precursor |
RefSeq | XP_002317208.1 | 0 | 1 | 547 | 1 | 549 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518523.1 | 0 | 54 | 547 | 55 | 547 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 235 | 547 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 233 | 539 | 5 | 311 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 6e-26 | 236 | 535 | 5 | 337 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 6e-26 | 236 | 535 | 5 | 337 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 6e-26 | 236 | 535 | 5 | 337 | A Chain A, Pectin Methylesterase From Carrot |