| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10008868m |
| Family | GH9 |
| Protein Properties | Length: 518 Molecular Weight: 57125.2 Isoelectric Point: 6.3252 |
| Chromosome | Chromosome/Scaffold: 1 Start: 6948264 End: 6950606 |
| Description | glycosyl hydrolase 9B5 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH9 | 49 | 503 | 0 |
| KYADALKIALQFFDIQKSGKLENNKISWRGDSGLKDGSDASIDLSKGLYDAGDHMKFGFPMAFTTSVLSWSILEYGDQMASVNLLDHAKDSLKWTTDFLV NAHPSPNVLYIQVGDPETDHKCWDRPETMSRKRTLTKIDTKTPGTEVAAETAAALAAASLVFKESDTKYSSTLLKHAKQLFDFADNHRGSYSVNIPEVQS YYNSTGYGDELLWAASWLYHATEDKTYLDFVSKNGEEFGNFGSPSWFSWDNKLPGTHILLSRLTFFKKGLSGNKGLQGYKDTAEAVMCGLIPSSPTATSS RTEGGLIWVSEWNALQHPVSSAFLATLYSDYMLTSGIKEFSCSDQSFKPSDLRKFARSQADYMLGKNPEKMSYLVGYGEKYPEFVHHRGASIPADANTGC KDGFKWLNSEEPNPNVAYGALVGGPFLNDTFIDARNNSMQNEPSTYNSALVVGLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 518 Download |
| MVAKPKSRCC CCSWFIGIIV LIAVILAVIF TFRHRSNHSD DDSGSVDKKY ADALKIALQF 60 FDIQKSGKLE NNKISWRGDS GLKDGSDASI DLSKGLYDAG DHMKFGFPMA FTTSVLSWSI 120 LEYGDQMASV NLLDHAKDSL KWTTDFLVNA HPSPNVLYIQ VGDPETDHKC WDRPETMSRK 180 RTLTKIDTKT PGTEVAAETA AALAAASLVF KESDTKYSST LLKHAKQLFD FADNHRGSYS 240 VNIPEVQSYY NSTGYGDELL WAASWLYHAT EDKTYLDFVS KNGEEFGNFG SPSWFSWDNK 300 LPGTHILLSR LTFFKKGLSG NKGLQGYKDT AEAVMCGLIP SSPTATSSRT EGGLIWVSEW 360 NALQHPVSSA FLATLYSDYM LTSGIKEFSC SDQSFKPSDL RKFARSQADY MLGKNPEKMS 420 YLVGYGEKYP EFVHHRGASI PADANTGCKD GFKWLNSEEP NPNVAYGALV GGPFLNDTFI 480 DARNNSMQNE PSTYNSALVV GLLSSLVTTS SSLESFK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00119 | PLN00119 | 1.0e-154 | 44 | 497 | 460 | + endoglucanase | ||
| PLN02171 | PLN02171 | 7.0e-155 | 50 | 497 | 458 | + endoglucanase | ||
| PLN02340 | PLN02340 | 7.0e-157 | 50 | 492 | 450 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 3.0e-170 | 50 | 497 | 453 | + Glycosyl hydrolase family 9. | ||
| PLN02345 | PLN02345 | 0 | 53 | 497 | 449 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM63477.1 | 0 | 45 | 517 | 53 | 525 | endo-beta-1,4-glucanase, putative [Arabidopsis thaliana] |
| RefSeq | NP_173423.1 | 0 | 1 | 516 | 1 | 515 | AtGH9B5 (Arabidopsis thaliana Glycosyl Hydrolase 9B5); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_177697.1 | 0 | 45 | 517 | 53 | 525 | AtGH9B7 (Arabidopsis thaliana glycosyl hydrolase 9B7); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002276739.1 | 0 | 35 | 516 | 34 | 524 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002510516.1 | 0 | 44 | 516 | 49 | 522 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 50 | 507 | 5 | 429 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1ksc_A | 0 | 50 | 507 | 5 | 429 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1ks8_A | 0 | 50 | 507 | 5 | 429 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 50 | 507 | 6 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 50 | 507 | 6 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
