| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10008966m |
| Family | GT76 |
| Protein Properties | Length: 492 Molecular Weight: 55553 Isoelectric Point: 9.2965 |
| Chromosome | Chromosome/Scaffold: 1 Start: 4103826 End: 4107049 |
| Description | transferases, transferring hexosyl groups |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT76 | 16 | 491 | 0 |
| IKYAIFSRLLVLLLTLLWRSLLQPYDTSAALNPPCLYHKEDPPPLLVANAASRSLENSIVWDSVYFLRITECGYEYEQTYAFLPLLPFFISILSRTVFAP LVPLIGLRAVMVLSGYIVSNLAFVFAAIYLFRVSVIILKDTEASFRASIIFCFNPASIFYSAIYTESLYALFSIGGVYHLLSGTSNVAVLWFALSGCARS NGVLNAGYICFQTMHQAYEALYQKRRIYLAIQVLVAGFLRCVCICLPFVAFQAYGYYNICHGHTLDEMRPWCKGRIPLLYNFIQSHYWGVGFLKYFQFKQ LPNFLLASPILSLAVCSIMSYMKSRPELFISLGFQATEKEKRSAARLYSLNDAVETSVKSSTNEGNRDIRQRKPSKKDVTVTKAASESSSPEKSGYFSAD VFPFIVHLGLMTTTAFFIMHVQVATRFLSASPPLYWFASNLIASPKHNKWGYLIRSYCAAYILLGTLLFSNFYPFT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 492 Download |
| MVNTMESKSR KESILIKYAI FSRLLVLLLT LLWRSLLQPY DTSAALNPPC LYHKEDPPPL 60 LVANAASRSL ENSIVWDSVY FLRITECGYE YEQTYAFLPL LPFFISILSR TVFAPLVPLI 120 GLRAVMVLSG YIVSNLAFVF AAIYLFRVSV IILKDTEASF RASIIFCFNP ASIFYSAIYT 180 ESLYALFSIG GVYHLLSGTS NVAVLWFALS GCARSNGVLN AGYICFQTMH QAYEALYQKR 240 RIYLAIQVLV AGFLRCVCIC LPFVAFQAYG YYNICHGHTL DEMRPWCKGR IPLLYNFIQS 300 HYWGVGFLKY FQFKQLPNFL LASPILSLAV CSIMSYMKSR PELFISLGFQ ATEKEKRSAA 360 RLYSLNDAVE TSVKSSTNEG NRDIRQRKPS KKDVTVTKAA SESSSPEKSG YFSADVFPFI 420 VHLGLMTTTA FFIMHVQVAT RFLSASPPLY WFASNLIASP KHNKWGYLIR SYCAAYILLG 480 TLLFSNFYPF T* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5542 | COG5542 | 3.0e-17 | 120 | 326 | 211 | + Predicted integral membrane protein [Function unknown] | ||
| pfam04188 | Mannosyl_trans2 | 3.0e-19 | 419 | 491 | 81 | + Mannosyltransferase (PIG-V)). This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI. | ||
| pfam04188 | Mannosyl_trans2 | 5.0e-125 | 9 | 359 | 352 | + Mannosyltransferase (PIG-V)). This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005789 | endoplasmic reticulum membrane |
| GO:0006506 | GPI anchor biosynthetic process |
| GO:0016021 | integral to membrane |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC17633.1 | 0 | 1 | 491 | 1 | 492 | Contains similarity to hypothetical protein C18b11.05 gb |
| RefSeq | NP_172652.2 | 0 | 1 | 491 | 1 | 489 | transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002283435.1 | 0 | 8 | 491 | 8 | 497 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002304011.1 | 0 | 1 | 491 | 1 | 483 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527781.1 | 0 | 6 | 491 | 3 | 500 | conserved hypothetical protein [Ricinus communis] |
