| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10009126m |
| Family | GT14 |
| Protein Properties | Length: 449 Molecular Weight: 51453.8 Isoelectric Point: 8.7103 |
| Chromosome | Chromosome/Scaffold: 1 Start: 918661 End: 921060 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 104 | 359 | 0 |
| LAYLISGTKGDSHRMMRTLQAVYHPRNQYVLHLDLEAPPRERTELAMSVKNDPTFREMENVRVMAQSNLVTYKGPTMIACTLQAVAILLRESLHWDWFLN LSASDYPLVTQDDLLYVFSNLSRNVNFIENMQLTGWKLNQRAKSIIVDPGLYLSKKSDIAWTTQRRPLPTAFKLFTGSAWIMLTRSFLEYCIWGWDNFPR TILMYYTNFVSSPEGYFHTVICNSKEFVNTAIGHDLHYIAWDNPPKQHPRSLSLKD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 449 Download |
| MRKLYRKLVS FRDPFARVKR HVSSQSGFRA FSDRKWMFPF LASLIMSITL LMLFISGQFD 60 GFYAEESQLP LDVEAESNEY FVESGFEKSL NSTADVVNPE PPRLAYLISG TKGDSHRMMR 120 TLQAVYHPRN QYVLHLDLEA PPRERTELAM SVKNDPTFRE MENVRVMAQS NLVTYKGPTM 180 IACTLQAVAI LLRESLHWDW FLNLSASDYP LVTQDDLLYV FSNLSRNVNF IENMQLTGWK 240 LNQRAKSIIV DPGLYLSKKS DIAWTTQRRP LPTAFKLFTG SAWIMLTRSF LEYCIWGWDN 300 FPRTILMYYT NFVSSPEGYF HTVICNSKEF VNTAIGHDLH YIAWDNPPKQ HPRSLSLKDF 360 DNMVKSKAPF ARKFPKNDPT LDKIDKELLG RTHRFAPGGW CVGSSANGND PCSLQGDDSV 420 LKPGPGSERL QELVQTLSSD EFRRKQCS* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 6.0e-81 | 104 | 364 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 0 | 32 | 447 | 422 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001077453.1 | 0 | 90 | 448 | 1 | 358 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | NP_171851.1 | 0 | 1 | 448 | 1 | 447 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | NP_192243.1 | 0 | 1 | 448 | 1 | 448 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | XP_002319376.1 | 0 | 18 | 448 | 1 | 433 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517977.1 | 0 | 18 | 448 | 7 | 439 | acetylglucosaminyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.00000001 | 120 | 324 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.00000001 | 120 | 324 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.00000001 | 120 | 324 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.00000001 | 120 | 324 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.00000003 | 120 | 324 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
