Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10009196m |
Family | GH17 |
Protein Properties | Length: 432 Molecular Weight: 45960.9 Isoelectric Point: 8.337 |
Chromosome | Chromosome/Scaffold: 1 Start: 11574402 End: 11576572 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 30 | 350 | 0 |
IGVNYGQIGDNLPPPSEVIPLIKSIGATKVKLYDANPQILKAFANTGIEFIVGLGNEYLSKMKDPSKALTWIKQNVTPFLPATNITCITIGNEILALNDS SLTVNLLPAMQGVHSALTTAGLSGQISVTTAHSLSILKTSFPPSAGEFQPDLVDALTPILDFHRKTESPFLINAYPFFAYKGNPKEVPLDFVLFQPNQGV VDPTTGFHYDNMLFAQIDAVYSALAAAGYKSLRVEISETGWPSKGDEDEVGATPENAKRYNGNLIKLMMSGKKTKTPLKPSNDLNIYVFALFNENLKPGP TSERNYGLFKPDGTQAYSLGF |
Full Sequence |
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Protein Sequence Length: 432 Download |
MELNIFHRSS PILFLLLSVT FIFPTAITSI GVNYGQIGDN LPPPSEVIPL IKSIGATKVK 60 LYDANPQILK AFANTGIEFI VGLGNEYLSK MKDPSKALTW IKQNVTPFLP ATNITCITIG 120 NEILALNDSS LTVNLLPAMQ GVHSALTTAG LSGQISVTTA HSLSILKTSF PPSAGEFQPD 180 LVDALTPILD FHRKTESPFL INAYPFFAYK GNPKEVPLDF VLFQPNQGVV DPTTGFHYDN 240 MLFAQIDAVY SALAAAGYKS LRVEISETGW PSKGDEDEVG ATPENAKRYN GNLIKLMMSG 300 KKTKTPLKPS NDLNIYVFAL FNENLKPGPT SERNYGLFKP DGTQAYSLGF TLNDVVRGAS 360 GGGGGGGNSS SSGGGGKTPV LPVSPVAPDS ASTGYLAISY APVTGKRKGK GEVLSMVVMS 420 MLLLLLARHL L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-7 | 101 | 327 | 229 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 4.0e-103 | 30 | 350 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF31288.1 | 0 | 1 | 406 | 1 | 405 | AC006424_17 CDS [Arabidopsis thaliana] |
RefSeq | NP_174563.2 | 0 | 1 | 431 | 1 | 426 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002278950.1 | 0 | 36 | 426 | 33 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300505.1 | 0 | 16 | 349 | 1 | 332 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518930.1 | 0 | 15 | 401 | 12 | 381 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 30 | 351 | 2 | 316 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3f55_C | 0 | 30 | 351 | 2 | 316 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3f55_B | 0 | 30 | 351 | 2 | 316 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3f55_A | 0 | 30 | 351 | 2 | 316 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3em5_D | 0 | 30 | 351 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |