Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10009286m |
Family | GH100 |
Protein Properties | Length: 415 Molecular Weight: 47360.9 Isoelectric Point: 7.7307 |
Chromosome | Chromosome/Scaffold: 1 Start: 7991873 End: 7993678 |
Description | Plant neutral invertase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH100 | 1 | 401 | 0 |
MNGEPDIVKNFLLKTIQIQGREKKIDRFKLGEGAMPASFKILHDPIKKTDTVIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDTSLAETPECQKGMR LILSLCLSEGFDTFPTLLCADGCSMVDRRMGVYGYPIEIQALFFMALRSAMSMLKHDTEGKEFMERIVKRLHALSFHMRSYFWLDFQQLNDIYRYKTEEY SHTAVNKFNVIPDSIPEWVFDFMPLRGGYFIGNVSPARMDFRWFALGNCVAILASLATPEQSAAIMDLIEERWEELVGEMPVKICHPAIESHEWRIVTGC DPKNTRWSYHNGGSWPVLLWLLTAACIKTGRPQIARRAIDLAEARLLKDGWPEYYDGKSGRFIGKQARKYQTWSIAGYLVAKMMLEDPSHLGMISLEEDK Q |
Full Sequence |
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Protein Sequence Length: 415 Download |
MNGEPDIVKN FLLKTIQIQG REKKIDRFKL GEGAMPASFK ILHDPIKKTD TVIADFGESA 60 IGRVAPVDSG FWWIILLRAY TKSTGDTSLA ETPECQKGMR LILSLCLSEG FDTFPTLLCA 120 DGCSMVDRRM GVYGYPIEIQ ALFFMALRSA MSMLKHDTEG KEFMERIVKR LHALSFHMRS 180 YFWLDFQQLN DIYRYKTEEY SHTAVNKFNV IPDSIPEWVF DFMPLRGGYF IGNVSPARMD 240 FRWFALGNCV AILASLATPE QSAAIMDLIE ERWEELVGEM PVKICHPAIE SHEWRIVTGC 300 DPKNTRWSYH NGGSWPVLLW LLTAACIKTG RPQIARRAID LAEARLLKDG WPEYYDGKSG 360 RFIGKQARKY QTWSIAGYLV AKMMLEDPSH LGMISLEEDK QTKPVIKRSY SWTC* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 4.0e-5 | 308 | 404 | 101 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
PLN03005 | PLN03005 | 0 | 1 | 414 | 414 | + beta-fructofuranosidase | ||
PLN02973 | PLN02973 | 0 | 1 | 414 | 414 | + beta-fructofuranosidase | ||
pfam12899 | Glyco_hydro_100 | 0 | 1 | 388 | 388 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
PLN02703 | PLN02703 | 0 | 1 | 401 | 406 | + beta-fructofuranosidase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC25521.1 | 0 | 1 | 413 | 82 | 487 | Similar to LIM17 gene product gb |
GenBank | AAM65926.1 | 0 | 1 | 413 | 122 | 534 | putative invertase [Arabidopsis thaliana] |
GenBank | ABA08442.1 | 0 | 1 | 414 | 144 | 557 | neutral/alkaline invertase [Manihot esculenta] |
EMBL | CBI18174.1 | 0 | 1 | 414 | 79 | 492 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_564177.1 | 0 | 1 | 413 | 122 | 534 | beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative [Arabidopsis thaliana] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CK269009 | 329 | 85 | 413 | 0 |
ES848839 | 359 | 48 | 404 | 0 |
ES809234 | 324 | 75 | 398 | 0 |
DT454311 | 311 | 88 | 397 | 0 |
JG588921 | 317 | 81 | 397 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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