| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10009365m |
| Family | GT43 |
| Protein Properties | Length: 396 Molecular Weight: 45406.1 Isoelectric Point: 9.9915 |
| Chromosome | Chromosome/Scaffold: 1 Start: 9432154 End: 9435896 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT43 | 164 | 371 | 0 |
| AQTLRLVDSPVLWIVVEGNAASFETSEILRKTGVMYRHLVCKRNMTSIKDRGVHQRNTALEHIELHKLDGIVYFADDDNIYSLELFQSLRQIRRFGTWPV AMLAPSKNKAILEGPVCNGSQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPFTHPTRQLDTVKEGFQETTFIEQVVADESEMEGVPPACSR ILNWHLHL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 396 Download |
| MASIRRTLSP MYHDRAHENG GAHKGFTIGG SSSKHNSSQF LSYLTKLIGV TSDPKSSRRG 60 PWRRPFYQFL VFFLLGFVLG LTPFGKMEDV NGSDRFSFEI KQPYVEERLD NNKKREEVAV 120 DAVSFVAETE TGKKEINFVP KKLIIVVTPT YNRAMQAYYL NRIAQTLRLV DSPVLWIVVE 180 GNAASFETSE ILRKTGVMYR HLVCKRNMTS IKDRGVHQRN TALEHIELHK LDGIVYFADD 240 DNIYSLELFQ SLRQIRRFGT WPVAMLAPSK NKAILEGPVC NGSQVIGWHT NEKSKRLRRF 300 HVDMSGFAFN STILWDPKRW RRPFTHPTRQ LDTVKEGFQE TTFIEQVVAD ESEMEGVPPA 360 CSRILNWHLH LDARDVPYPQ GWAIQKNLQA LITMK* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02458 | PLN02458 | 8.0e-85 | 110 | 371 | 279 | + transferase, transferring glycosyl groups | ||
| pfam03360 | Glyco_transf_43 | 4.0e-88 | 163 | 373 | 220 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 2.0e-112 | 142 | 373 | 238 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD45998.1 | 0 | 1 | 383 | 1 | 383 | AC005916_10 Contains similarity to gb |
| GenBank | AAF24965.1 | 0 | 1 | 339 | 1 | 338 | AC012375_28 T22C5.4 [Arabidopsis thaliana] |
| GenBank | AAM64331.1 | 0 | 87 | 395 | 1 | 308 | glycoprotein-specific UDP-glucuronyltransferase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_973922.1 | 0 | 1 | 395 | 1 | 394 | glycosyl transferase family 43 protein [Arabidopsis thaliana] |
| RefSeq | XP_002301102.1 | 0 | 1 | 395 | 1 | 395 | glycosyl transferase [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2d0j_D | 2e-30 | 144 | 368 | 5 | 223 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 2d0j_C | 2e-30 | 144 | 368 | 5 | 223 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 2d0j_B | 2e-30 | 144 | 368 | 5 | 223 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 2d0j_A | 2e-30 | 144 | 368 | 5 | 223 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 1v84_B | 1e-28 | 144 | 368 | 5 | 230 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
