| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10009607m |
| Family | GT29 |
| Protein Properties | Length: 349 Molecular Weight: 39470.4 Isoelectric Point: 8.3054 |
| Chromosome | Chromosome/Scaffold: 1 Start: 2841467 End: 2844629 |
| Description | MALE GAMETOPHYTE DEFECTIVE 2 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT29 | 152 | 240 | 1.8e-29 |
| DKCYNRTLCEENLNVILPAKPPFHPRQFHKCAVVGNSGDLLKTEFGAEIDSHDAVFRDNEAPVNEKYAKYVGLKRDFRLVVRGAARNMV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 349 Download |
| MRSHQAGRKL PFLQVLCGVA VFSVFLFSIQ SSFFAASNTR KLDLQQEDIQ ILSGFQSSVQ 60 QCVANRGLGL SAHIIDHCNL ILKFPEGTNS TWYNAQFKVF EALEFKYNVC EAVLLWEQYR 120 NMTTVLTREY LDVRPDGWLD YAAMRIAQLG ADKCYNRTLC EENLNVILPA KPPFHPRQFH 180 KCAVVGNSGD LLKTEFGAEI DSHDAVFRDN EAPVNEKYAK YVGLKRDFRL VVRGAARNMV 240 KILNGSDNEV LIIKSVTHRD FNEMIKGIPN PVYLFQGIVL RRGAKGTGMK SIELALSMCD 300 IVDIYGFTVD PGYTEWTRYF STPRKGHNPL QGRAYYQLLE CLGVQIIT* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00777 | Glyco_transf_29 | 6.0e-45 | 139 | 344 | 249 | + Glycosyltransferase family 29 (sialyltransferase). Members of this family belong to glycosyltransferase family 29. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008373 | sialyltransferase activity |
| GO:0030173 | integral to Golgi membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI21279.1 | 0 | 9 | 344 | 16 | 348 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_172342.3 | 0 | 1 | 346 | 1 | 345 | glycosyl transferase family 29 protein / sialyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | NP_850940.1 | 0 | 1 | 344 | 1 | 343 | glycosyl transferase family 29 protein / sialyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002320429.1 | 0 | 8 | 344 | 7 | 345 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512844.1 | 0 | 1 | 344 | 1 | 346 | alpha-2,8-sialyltransferase 8b, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wnf_A | 0.0000000002 | 181 | 332 | 99 | 266 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 2wnb_A | 0.0000000002 | 181 | 332 | 99 | 266 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase In Complex With Disaccharide And Cmp |
| PDB | 2wml_A | 0.0000000002 | 181 | 332 | 99 | 266 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
