Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10009618m |
Family | GH17 |
Protein Properties | Length: 346 Molecular Weight: 37859.6 Isoelectric Point: 6.5257 |
Chromosome | Chromosome/Scaffold: 1 Start: 11686334 End: 11687371 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 34 | 344 | 0 |
IGLNYGLLGDNLPTPPNVLNLYKSIGITKIRIFDPNTGVLDALRGHRGFEVTVGVRDQDLAPLAASEEAVKGWFATNIEPYLADVNIVFITVGNEVIPGP IGPQVLPVMQSLTNLVKSRNLPISISTVVAMSNLEQSYPPSTGKFTPQAWEQLVPVLKLLSQTNTPILVNIYPYFPYATDPAHIRLDYATFTAKAIVVQD GPLGYSNMFDAIFDAFVWAMEKEGVKDLPMVVSETGWPSAGNGNLTTPEIAGTYNRNVVKHIVSGKGTPKRPNIGFDGYIFATFNENQKPAGTEQNFGLY NPTDMKPIYKL |
Full Sequence |
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Protein Sequence Length: 346 Download |
MVYSSMKLFL FFLSCIMIIF NHNTSGLVTK ANSIGLNYGL LGDNLPTPPN VLNLYKSIGI 60 TKIRIFDPNT GVLDALRGHR GFEVTVGVRD QDLAPLAASE EAVKGWFATN IEPYLADVNI 120 VFITVGNEVI PGPIGPQVLP VMQSLTNLVK SRNLPISIST VVAMSNLEQS YPPSTGKFTP 180 QAWEQLVPVL KLLSQTNTPI LVNIYPYFPY ATDPAHIRLD YATFTAKAIV VQDGPLGYSN 240 MFDAIFDAFV WAMEKEGVKD LPMVVSETGW PSAGNGNLTT PEIAGTYNRN VVKHIVSGKG 300 TPKRPNIGFD GYIFATFNEN QKPAGTEQNF GLYNPTDMKP IYKLF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0002 | 262 | 334 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-100 | 34 | 344 | 314 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM62473.1 | 0 | 1 | 345 | 1 | 345 | beta-1,3-glucanase bg4 [Arabidopsis thaliana] |
RefSeq | NP_174592.1 | 0 | 1 | 345 | 1 | 335 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
RefSeq | NP_197533.1 | 0 | 1 | 345 | 1 | 345 | BETAG4; catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_197534.1 | 0 | 1 | 345 | 1 | 354 | BG5 (beta-1,3-glucanase 5); glucan 1,3-beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_197539.1 | 0 | 7 | 345 | 6 | 344 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 34 | 344 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 34 | 339 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 34 | 339 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 34 | 339 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 34 | 339 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |