| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10009807m |
| Family | CE10 |
| Protein Properties | Length: 315 Molecular Weight: 35302.4 Isoelectric Point: 5.0101 |
| Chromosome | Chromosome/Scaffold: 1 Start: 15879836 End: 15881533 |
| Description | alpha/beta-Hydrolases superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE10 | 39 | 312 | 0 |
| QETGVLSKDIIIDSITGLSARIYRPESVQPGQKLPLVLYFHGGAFLIASASFPCYHTSVNKLVAEANVIAVSVSYRLAPEHPLPIAYEDSWTALKTIQTM NEPWINDYADFNRLFLIGDSAGANISHHLAFRAKQSDETAKIKGIGMINPYFWGTQPIESEINDKGRKQMVDGWWDFVCTSEKGSDDPWINPFTDESPGL EGLGCERVMIVVAEKDILKERGKLYYETLVKSEWRGKVEMMETKGKDHVFHIFEPDCDEATELVRRLALFINQL | |||
| Full Sequence |
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| Protein Sequence Length: 315 Download |
| MESKKKQVPF ELLPWLVVHS DGKLERLGGT EVCPPGLDQE TGVLSKDIII DSITGLSARI 60 YRPESVQPGQ KLPLVLYFHG GAFLIASASF PCYHTSVNKL VAEANVIAVS VSYRLAPEHP 120 LPIAYEDSWT ALKTIQTMNE PWINDYADFN RLFLIGDSAG ANISHHLAFR AKQSDETAKI 180 KGIGMINPYF WGTQPIESEI NDKGRKQMVD GWWDFVCTSE KGSDDPWINP FTDESPGLEG 240 LGCERVMIVV AEKDILKERG KLYYETLVKS EWRGKVEMME TKGKDHVFHI FEPDCDEATE 300 LVRRLALFIN QLVA* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG2272 | PnbA | 6.0e-9 | 55 | 118 | 64 | + Carboxylesterase type B [Lipid metabolism] | ||
| pfam00135 | COesterase | 1.0e-10 | 60 | 117 | 58 | + Carboxylesterase family. | ||
| cd00312 | Esterase_lipase | 8.0e-11 | 60 | 167 | 124 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
| COG0657 | Aes | 2.0e-29 | 52 | 310 | 263 | + Esterase/lipase [Lipid metabolism] | ||
| pfam07859 | Abhydrolase_3 | 9.0e-55 | 75 | 290 | 220 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM61103.1 | 0 | 1 | 314 | 1 | 314 | unknown [Arabidopsis thaliana] |
| GenBank | ABB89003.1 | 0 | 7 | 311 | 8 | 315 | CXE carboxylesterase [Malus pumila] |
| RefSeq | NP_564507.1 | 0 | 1 | 314 | 1 | 314 | hydrolase [Arabidopsis thaliana] |
| RefSeq | XP_002510251.1 | 0 | 3 | 311 | 2 | 311 | Gibberellin receptor GID1, putative [Ricinus communis] |
| RefSeq | XP_002526230.1 | 0 | 1 | 311 | 1 | 319 | catalytic, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ed1_F | 3e-37 | 10 | 310 | 26 | 348 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
| PDB | 3ed1_E | 3e-37 | 10 | 310 | 26 | 348 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
| PDB | 3ed1_D | 3e-37 | 10 | 310 | 26 | 348 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
| PDB | 3ed1_C | 3e-37 | 10 | 310 | 26 | 348 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
| PDB | 3ed1_B | 3e-37 | 10 | 310 | 26 | 348 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EE539191 | 248 | 1 | 248 | 0 |
| EW737450 | 246 | 70 | 315 | 0 |
| FD949941 | 253 | 1 | 253 | 0 |
| ES789964 | 308 | 7 | 311 | 0 |
| EG631244 | 308 | 7 | 311 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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