CAZyme Information

Basic Information
SpeciesCapsella rubella
Cazyme IDCarubv10010118m
FamilyGT2
Protein PropertiesLength: 247 Molecular Weight: 27754.2 Isoelectric Point: 9.2601
ChromosomeChromosome/Scaffold: 1 Start: 7151409 End: 7153167
DescriptionNucleotide-diphospho-sugar transferases superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT2161840
  SIIIPTYNERLNIAIIVYLIFKHLRDVDFEIVVVDDGSPDGTQEIVMQLQKLYGEDRILLRARAKKLGLGTAYIHGLKYASGDFVVIMDADLSHHPKYLP
  SFIKKQLETNASIVTGTRYVKGGGVHGWNLMRKLTSRGANVLAQTFLWPGVSDLTGSFRLYKKEVLEDV
Full Sequence
Protein Sequence     Length: 247     Download
MADEKENNGE KKYKYSIIIP TYNERLNIAI IVYLIFKHLR DVDFEIVVVD DGSPDGTQEI    60
VMQLQKLYGE DRILLRARAK KLGLGTAYIH GLKYASGDFV VIMDADLSHH PKYLPSFIKK    120
QLETNASIVT GTRYVKGGGV HGWNLMRKLT SRGANVLAQT FLWPGVSDLT GSFRLYKKEV    180
LEDVISSCVS KGYVFQMEMI VRASRKGYQI EEVPITFVDR VFGTSKLGGS EIVEYLKGLV    240
YLLLTT* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00535Glycos_transf_21.0e-3416184170+
cd04188DPG_synthase3.0e-4017226215+
cd04179DPM_DPG-synthase_like3.0e-6917203188+
cd06442DPM1_like4.0e-13217242226+
PLN02726PLN027266.0e-17116246232+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAM63196.1062462242unknown [Arabidopsis thaliana]
RefSeqNP_564118.1012461246dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative [Arabidopsis thaliana]
RefSeqXP_002285933.1012461243PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002300644.10102464240predicted protein [Populus trichocarpa]
RefSeqXP_002307788.10102462238predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2z87_B0.0000000021613595213A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp- Galnac And Udp
PDB2z87_A0.0000000021613595213A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp- Galnac And Udp
PDB2z86_D0.0000000021613596214A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EX072349232162470
EX136578232162470
DW499473231162460
FC919240232162470
DV439320232162470
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_007_00839.1Aquca_007_00839.2
Arabidopsis lyrata889509
Arabidopsis thalianaAT1G20575.1
Brachypodium distachyonBradi2g19800.1
Brassica rapaBra025828Bra012235
Capsella rubellaCarubv10010457m
Chlamydomonas reinhardtiiCre03.g150950.t1.1
Citrus clementinaCiclev10003501m
Citrus sinensisorange1.1g026146m
Cucumis sativusCucsa.272070.1Cucsa.272070.2Cucsa.272070.3Cucsa.272070.4
Eucalyptus grandisEucgr.F01769.1
Fragaria vescamrna01849.1-v1.0-hybrid
Glycine maxGlyma13g24040.2Glyma07g32560.4Glyma07g32560.3Glyma07g32560.1Glyma13g24040.1
Gossypium raimondiiGorai.005G113700.2Gorai.005G113700.1Gorai.005G113700.3Gorai.005G113700.4Gorai.002G116900.2
Gorai.002G116900.1
Linum usitatissimumLus10013228Lus10030748
Malus domesticaMDP0000284475
Manihot esculentacassava4.1_014960mcassava4.1_014955m
Medicago truncatulaMedtr2g097220.1
Mimulus guttatusmgv1a012434m
Oryza sativaLOC_Os03g60939.1
Panicum virgatumPavirv00006084mPavirv00010357mPavirv00010356mPavirv00041144mPavirv00011250m
Pavirv00010359m
Physcomitrella patensPp1s182_58V6.1
Phaseolus vulgarisPhvul.003G057700.1
Picea abiesMA_10426906g0010MA_158782g0100.50.214MA_159042g1170
Populus trichocarpaPotri.005G250900.1Potri.002G010300.1Potri.005G250900.2
Prunus persicappa010139m
Ricinus communis30170.m014358
Setaria italicaSi039247mSi037228m
Selaginella moellendorffii98270
Sorghum bicolorSb01g002910.1
Thellungiella halophilaThhalv10008599m
Vitis viniferaGSVIVT01008672001
Volvox carteriVocar20000557m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny