| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10010959m |
| Family | GH9 |
| Protein Properties | Length: 490 Molecular Weight: 54343.1 Isoelectric Point: 8.4903 |
| Chromosome | Chromosome/Scaffold: 1 Start: 8225136 End: 8227209 |
| Description | glycosyl hydrolase 9B6 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 28 | 482 | 0 |
| DYRDALRKSILFFEGQRSGKLPPDQRLKWRHDSALRDGSSAGVDLTGGYYDAGDNVKFGFPMAFTTTMMSWSVIDFGKTMGPELGNAVKAIKWGTDYLMK ATQIPGVVFVQVGDAYSDHNCWERPEDMDTLRTVYKIDKDHPGSEVAGETAAALAAASIVFEKRDPTYSKMLLDRAARVFAFAQKYRGAYSDSLYQAVCP FYCDFNGYEDELLWGAAWLHKASKRRVYREFIVKNQFILKAGDTIHEFGWDNKHAGINVLISKMVLMGKADYFQSFTRNADEFICSLLPGISHPQVQYSQ GGLLVKSGGSNMQHVTSLSFLLLTYSNYLSHANKVVQCGDFTASPALLRQVAKRQVDYILGDNPMKMSYMVGYGPRFPQMIHHRGSSVPSVVDHPGRIGC KDGSRYFLSPNPNPNLLIGAVVGGPNVTDDFPDSRPYFQLTEPTTYINAPLLGLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 490 Download |
| MAGNSFMTPA IMLAVLLLIS PKIYAGHDYR DALRKSILFF EGQRSGKLPP DQRLKWRHDS 60 ALRDGSSAGV DLTGGYYDAG DNVKFGFPMA FTTTMMSWSV IDFGKTMGPE LGNAVKAIKW 120 GTDYLMKATQ IPGVVFVQVG DAYSDHNCWE RPEDMDTLRT VYKIDKDHPG SEVAGETAAA 180 LAAASIVFEK RDPTYSKMLL DRAARVFAFA QKYRGAYSDS LYQAVCPFYC DFNGYEDELL 240 WGAAWLHKAS KRRVYREFIV KNQFILKAGD TIHEFGWDNK HAGINVLISK MVLMGKADYF 300 QSFTRNADEF ICSLLPGISH PQVQYSQGGL LVKSGGSNMQ HVTSLSFLLL TYSNYLSHAN 360 KVVQCGDFTA SPALLRQVAK RQVDYILGDN PMKMSYMVGY GPRFPQMIHH RGSSVPSVVD 420 HPGRIGCKDG SRYFLSPNPN PNLLIGAVVG GPNVTDDFPD SRPYFQLTEP TTYINAPLLG 480 LLGYFSSRS* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02308 | PLN02308 | 0 | 1 | 489 | 489 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 24 | 486 | 463 | + endoglucanase | ||
| PLN03009 | PLN03009 | 0 | 11 | 487 | 481 | + cellulase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 28 | 483 | 462 | + Glycosyl hydrolase family 9. | ||
| PLN02171 | PLN02171 | 0 | 5 | 487 | 495 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA67157.1 | 0 | 1 | 489 | 1 | 489 | endo-1,4-beta-glucanase [Arabidopsis thaliana] |
| RefSeq | NP_173735.1 | 0 | 1 | 487 | 1 | 487 | AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_177228.1 | 0 | 27 | 489 | 27 | 489 | ATGH9B1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | XP_002315868.1 | 0 | 23 | 487 | 13 | 477 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527779.1 | 0 | 4 | 489 | 7 | 492 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 27 | 482 | 3 | 425 | A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT COMPLEXED WITH Cellotetraose |
| PDB | 1ksc_A | 0 | 27 | 482 | 3 | 425 | A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT COMPLEXED WITH Cellotetraose |
| PDB | 1ks8_A | 0 | 27 | 482 | 3 | 425 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 28 | 476 | 5 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 28 | 476 | 5 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
