Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10011227m |
Family | GH1 |
Protein Properties | Length: 469 Molecular Weight: 53096 Isoelectric Point: 6.5134 |
Chromosome | Chromosome/Scaffold: 1 Start: 15570908 End: 15574291 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 23 | 451 | 0 |
RSDFPESFAFGAAISAYQWEGAVDEDGRKPSVWDTFVHSRKIDNGDIACDGYHKYKEDVKLIAETGLHAFRFSISWSRLLNGRGSINPKGLQFYKNFIQE LVKHGIEPHVTLHHFDHPQYLEDDYGGWINREIIKDFTAYADVCFKEFGSYVKFWTTINEGNIFTIGGYNDGNSPPGRCSLPGKNCLLGNSSTETYIVGH NLLLAHASASRLYKQKYKDIQGGSIGFSLFAIHFTPSTSSKDDEIATQRANDFFFGWMLKPLIYGDYPDAMRKTVGSRLPVFSEEESEQVKGSSDFIGII QYLTASVTNIYVVSPWAMEGILEYIKQRYDNPPVYILENGKAMKQDLELQQKDTARIEYLDAYIGAVLKAIRNGSDTRGYFVWSFMDLYELLSGYENSYG LYSVNFSDPYLKRSPKLSAHWYFGFLKSK |
Full Sequence |
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Protein Sequence Length: 469 Download |
MMMIVLLLLS LSGVGKCNNA YSRSDFPESF AFGAAISAYQ WEGAVDEDGR KPSVWDTFVH 60 SRKIDNGDIA CDGYHKYKED VKLIAETGLH AFRFSISWSR LLNGRGSINP KGLQFYKNFI 120 QELVKHGIEP HVTLHHFDHP QYLEDDYGGW INREIIKDFT AYADVCFKEF GSYVKFWTTI 180 NEGNIFTIGG YNDGNSPPGR CSLPGKNCLL GNSSTETYIV GHNLLLAHAS ASRLYKQKYK 240 DIQGGSIGFS LFAIHFTPST SSKDDEIATQ RANDFFFGWM LKPLIYGDYP DAMRKTVGSR 300 LPVFSEEESE QVKGSSDFIG IIQYLTASVT NIYVVSPWAM EGILEYIKQR YDNPPVYILE 360 NGKAMKQDLE LQQKDTARIE YLDAYIGAVL KAIRNGSDTR GYFVWSFMDL YELLSGYENS 420 YGLYSVNFSD PYLKRSPKLS AHWYFGFLKS KTSFLGSQGI MQLQSNFSS |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03356 | BGL | 5.0e-132 | 27 | 444 | 445 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 1.0e-148 | 26 | 444 | 457 | + Glycosyl hydrolase family 1. | ||
PLN02849 | PLN02849 | 0 | 16 | 469 | 482 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 0 | 19 | 468 | 484 | + beta-glucosidase | ||
PLN02998 | PLN02998 | 0 | 21 | 449 | 463 | + beta-glucosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD14488.1 | 0 | 1 | 469 | 4 | 526 | AAD14488 Similar to gi |
EMBL | CAA18113.1 | 0 | 1 | 464 | 7 | 459 | glucosidase like protein [Arabidopsis thaliana] |
RefSeq | NP_176217.2 | 0 | 1 | 469 | 4 | 510 | BGLU4 (BETA GLUCOSIDASE 4); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_193941.2 | 0 | 1 | 464 | 7 | 498 | BGLU3 (BETA GLUCOSIDASE 2); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_973974.1 | 0 | 1 | 469 | 8 | 485 | BGLU1 (BETA GLUCOSIDASE 1); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 22 | 450 | 13 | 488 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3gnp_A | 0 | 22 | 450 | 13 | 488 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3gno_A | 0 | 22 | 450 | 13 | 488 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_B | 0 | 22 | 449 | 16 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_A | 0 | 22 | 449 | 16 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |