CAZyme Information

Basic Information
SpeciesCapsella rubella
Cazyme IDCarubv10011399m
FamilyGT4
Protein PropertiesLength: 483 Molecular Weight: 53794.2 Isoelectric Point: 10.3005
ChromosomeChromosome/Scaffold: 1 Start: 6831733 End: 6833551
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT42734408.1e-22
  NEDILFGIINSVSRGKGQDLFLRAFHESLNIIKETKKLQVPTIHAVVVGSDMSAQTKFETELRNFVQGRKLQKVVHFVNKTMKVAPYLAAIDVLVQNSQA
  RGECFGRITIEAMAFKLPVLGTAAGGTMEIVVNRTTGLLHNAGKDGVLPLAANIVKLATNMDMRRTMG
Full Sequence
Protein Sequence     Length: 483     Download
MGKPSPNVWA TLQKKRWPLM ILLVLSVSTV GMILVRSTFD SCSVSGKMCG RLVVDKDQSS    60
DVKIRSVSGS MNPLGFMKSK LVLLVSHELS LSGGPLLLME LAFLLRGVDC EVVWITNQKP    120
VEADEVIKVL EHKMLDRGVQ VISAKSQKAI DIALKSDLVV LNTAVAGKWL DPVLKDNVPK    180
VLPKILWWIH EMRGHYFKPD LVKHLPFVAG AMIDSHATAE YWKNRTHDRL GIKMPKTYVV    240
HLGNSKELME VAEDSFAKKV LREQVRESLG VRNEDILFGI INSVSRGKGQ DLFLRAFHES    300
LNIIKETKKL QVPTIHAVVV GSDMSAQTKF ETELRNFVQG RKLQKVVHFV NKTMKVAPYL    360
AAIDVLVQNS QARGECFGRI TIEAMAFKLP VLGTAAGGTM EIVVNRTTGL LHNAGKDGVL    420
PLAANIVKLA TNMDMRRTMG EKGYERVKEM FLEHHMSHRI ASVLREVLQH AKIHSRTTNS    480
DH* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
COG0438RfaG5.0e-1896469389+
cd03819GT1_WavL_like4.0e-19263456194+
cd03798GT1_wlbH_like5.0e-20209467262+
cd03808GT1_cap1E_like6.0e-22229456229+
cd03801GT1_YqgM_like2.0e-3093465389+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAG12556.1014821458AC007797_16 Unknown Protein [Arabidopsis thaliana]
EMBLCBI19755.1014751461unnamed protein product [Vitis vinifera]
RefSeqNP_173401.1014821479glycosyl transferase family 1 protein [Arabidopsis thaliana]
RefSeqNP_177675.10104725458glycosyl transferase family 1 protein [Arabidopsis thaliana]
RefSeqXP_002281084.1014751477PREDICTED: hypothetical protein [Vitis vinifera]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2jjm_L0.000000008336472258390A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_K0.000000008336472258390A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_J0.000000008336472258390A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_I0.000000008336472258390A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_H0.000000008336472258390A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
Transmembrane Domains
StartEnd
1739
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DY2903883391114490
HO7808963291444720
HO8056393261474720
ES8320743201304490
FC8885562851113950
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_010_00577.1Aquca_001_00590.2Aquca_001_00590.1
Arabidopsis lyrata889408316473897892474368
Arabidopsis thalianaAT1G19710.1AT1G75420.1AT3G15940.2AT3G15940.1AT1G52420.1
Brachypodium distachyonBradi2g09620.1
Brassica rapaBra025759Bra027200Bra030384
Carica papayaevm.model.supercontig_99.5evm.model.supercontig_253.2
Capsella rubellaCarubv10020237mCarubv10013095m
Citrus clementinaCiclev10025538mCiclev10001031mCiclev10024994m
Citrus sinensisorange1.1g023290morange1.1g017123morange1.1g017085morange1.1g012132morange1.1g011954m
orange1.1g004942morange1.1g004760m
Cucumis sativusCucsa.105340.1Cucsa.300870.1
Eucalyptus grandisEucgr.F01601.1Eucgr.F03009.1Eucgr.J03011.1
Fragaria vescamrna15198.1-v1.0-hybridmrna14930.1-v1.0-hybridmrna05979.1-v1.0-hybrid
Glycine maxGlyma04g03170.1Glyma06g03220.1Glyma15g01640.6Glyma15g01640.5Glyma15g01640.4
Glyma15g01640.3Glyma08g22160.2Glyma07g03870.1Glyma13g43720.1
Gossypium raimondiiGorai.009G198800.1Gorai.003G012600.2Gorai.003G012600.1Gorai.007G199800.4Gorai.007G199800.3
Gorai.007G199800.1Gorai.009G132600.4Gorai.009G132600.3Gorai.009G132600.2Gorai.009G132600.1
Gorai.002G058400.1Gorai.011G077500.1
Linum usitatissimumLus10041786Lus10028338Lus10024281Lus10011469Lus10037523
Malus domesticaMDP0000210114MDP0000312093MDP0000064350MDP0000204168
Manihot esculentacassava4.1_006962mcassava4.1_006727mcassava4.1_002537m
Medicago truncatulaMedtr4g069840.1
Mimulus guttatusmgv1a005641mmgv1a002407m
Oryza sativaLOC_Os01g15780.1
Panicum virgatumPavirv00028369m
Physcomitrella patensPp1s24_249V6.3
Phaseolus vulgarisPhvul.009G060600.1Phvul.010G151400.1Phvul.005G172300.2Phvul.005G172300.1
Picea abiesMA_159042g1120
Populus trichocarpaPotri.005G118800.1Potri.002G031300.1Potri.001G179000.1Potri.001G179000.5
Prunus persicappa005334mppa005118mppa002059m
Ricinus communis30170.m01409429872.m00052635599.m00001450675.m000024
Setaria italicaSi002128m
Selaginella moellendorffii10326098243
Sorghum bicolorSb03g010200.1
Thellungiella halophilaThhalv10007567mThhalv10007509mThhalv10018489mThhalv10020188mThhalv10011288m
Thhalv10011286m
Vitis viniferaGSVIVT01009775001GSVIVT01018875001GSVIVT01017132001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)