Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10011427m |
Family | GH17 |
Protein Properties | Length: 405 Molecular Weight: 44875.2 Isoelectric Point: 5.7372 |
Chromosome | Chromosome/Scaffold: 1 Start: 10323224 End: 10325149 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 33 | 349 | 0 |
LGINYGQVGDNLPPPDKVLQLLSSLHINKTRIYDTNPRVLTSFANSNIEIFVTVENEMLPNLVDPQQALQWVTTRIKPYFPATKIGGIAVGNELYTDDDS SLIGYLVPAMTSIHGALVQTGLDKYIQVSTPNSLSVLQESYPPSAGCFRPEVAGVMTQLLSFLRNTKSPFWINAYPYFAYKDSPTKIPLDYVLFNPNPGM VDPYTKYHYDNMLYAQVDAVIFAMARLGYKDIEVGVSETGWPSKGDGDEVGATPANAAVYNKNLLKRQLQSEGTPLRPNMSFDVYLFALFNEDLKPGPTS ERNYGLYQPDETMAYNV |
Full Sequence |
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Protein Sequence Length: 405 Download |
MFSRIAMTNS IVLLLFSLIF LEHGWLFQRV SSLGINYGQV GDNLPPPDKV LQLLSSLHIN 60 KTRIYDTNPR VLTSFANSNI EIFVTVENEM LPNLVDPQQA LQWVTTRIKP YFPATKIGGI 120 AVGNELYTDD DSSLIGYLVP AMTSIHGALV QTGLDKYIQV STPNSLSVLQ ESYPPSAGCF 180 RPEVAGVMTQ LLSFLRNTKS PFWINAYPYF AYKDSPTKIP LDYVLFNPNP GMVDPYTKYH 240 YDNMLYAQVD AVIFAMARLG YKDIEVGVSE TGWPSKGDGD EVGATPANAA VYNKNLLKRQ 300 LQSEGTPLRP NMSFDVYLFA LFNEDLKPGP TSERNYGLYQ PDETMAYNVG LLSSSSSTSS 360 SSTSSSIISL TSSASTGIKK GTQQLIYWTC LYLLAIQMLI RRPY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-5 | 31 | 342 | 330 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 4.0e-93 | 33 | 349 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG52058.1 | 0 | 1 | 357 | 4 | 360 | AC022455_12 beta-1,3-glucanase precursor, putative; 75043-73120 [Arabidopsis thaliana] |
GenBank | AAM96962.1 | 0 | 1 | 404 | 4 | 408 | putative beta-1,3-glucanase precursor [Arabidopsis thaliana] |
RefSeq | NP_174300.2 | 0 | 1 | 404 | 4 | 408 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002270153.1 | 0 | 3 | 350 | 7 | 351 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002332000.1 | 0 | 1 | 375 | 4 | 372 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 33 | 349 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 33 | 351 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 33 | 351 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 33 | 351 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 33 | 351 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |