| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10011512m |
| Family | AA1 |
| Protein Properties | Length: 575 Molecular Weight: 63930.1 Isoelectric Point: 8.5701 |
| Chromosome | Chromosome/Scaffold: 1 Start: 2213822 End: 2215912 |
| Description | laccase 3 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 34 | 560 | 0 |
| ELHVREFVIEAKPVKRLCRTHQTITVNGQFPGPTLEVRNGDSLAITVINKARYNISLHWHGLRQLRNPWADGPEYITQCPIQPGQSYTYRIKIEDQEGTL WWHAHSHWLRATVYGALIIYPRLGSPYPFSMPKRDIPIILGEWWDRNPMDVLRLAQFTGAAPNVSDAYTINGQPGDLYRCSKPETLRFPIVPGETVQLRL INAALNQELFFTVANHPLTVVEVDSAYTKPFTTNVVMLGPGQTTNVLITANQRPGRYYIAARAYNSANAAFDNTTTTAIIEYVNAPSGQGQITPVFPVLP GFNDTATATAFVNRLRYWTRAPVPLEIDENLFFAVGLGLINCANPNSPRCQGPNGTRFAASMNNVSFVLPRTNSVMQAYYQGIPGIITSDFPPVPPVQFD YTGNVSRGLWQPVKATKAYKLKYKANVQIVLQDTSIVTPENHPMHLHGYQFYVVGSGFGNFDPKRDPASFNLFDPPERNTIGTPPGGWVAIRFVADNPGA WFMHCHIDSHLGWGLAMVFLVENGIGQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 575 Download |
| MKSQYPTNLG RIYALSIIFL LVCCTFLASL ASAELHVREF VIEAKPVKRL CRTHQTITVN 60 GQFPGPTLEV RNGDSLAITV INKARYNISL HWHGLRQLRN PWADGPEYIT QCPIQPGQSY 120 TYRIKIEDQE GTLWWHAHSH WLRATVYGAL IIYPRLGSPY PFSMPKRDIP IILGEWWDRN 180 PMDVLRLAQF TGAAPNVSDA YTINGQPGDL YRCSKPETLR FPIVPGETVQ LRLINAALNQ 240 ELFFTVANHP LTVVEVDSAY TKPFTTNVVM LGPGQTTNVL ITANQRPGRY YIAARAYNSA 300 NAAFDNTTTT AIIEYVNAPS GQGQITPVFP VLPGFNDTAT ATAFVNRLRY WTRAPVPLEI 360 DENLFFAVGL GLINCANPNS PRCQGPNGTR FAASMNNVSF VLPRTNSVMQ AYYQGIPGII 420 TSDFPPVPPV QFDYTGNVSR GLWQPVKATK AYKLKYKANV QIVLQDTSIV TPENHPMHLH 480 GYQFYVVGSG FGNFDPKRDP ASFNLFDPPE RNTIGTPPGG WVAIRFVADN PGAWFMHCHI 540 DSHLGWGLAM VFLVENGIGQ LQSVQPPPLD LPRC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 1.0e-53 | 41 | 155 | 117 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 3.0e-67 | 14 | 552 | 575 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 4.0e-72 | 20 | 563 | 597 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 3.0e-80 | 51 | 552 | 540 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 33 | 574 | 547 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_180580.1 | 0 | 15 | 574 | 7 | 570 | LAC3 (laccase 3); laccase [Arabidopsis thaliana] |
| RefSeq | NP_196330.3 | 0 | 19 | 574 | 7 | 569 | LAC13 (laccase 13); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002319955.1 | 0 | 20 | 574 | 19 | 576 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002326089.1 | 0 | 9 | 574 | 8 | 576 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516345.1 | 0 | 17 | 574 | 16 | 577 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 51 | 552 | 19 | 521 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1asq_A | 0 | 51 | 552 | 19 | 521 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1asp_B | 0 | 51 | 552 | 19 | 521 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1asp_A | 0 | 51 | 552 | 19 | 521 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1aso_B | 0 | 51 | 552 | 19 | 521 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
