Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10011654m |
Family | CE8 |
Protein Properties | Length: 578 Molecular Weight: 63866.1 Isoelectric Point: 9.1078 |
Chromosome | Chromosome/Scaffold: 1 Start: 652045 End: 654098 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 263 | 555 | 0 |
VTVNQDGTGNFTNITAAISAAPNNTDGSGGFFLIYVTAGIYEEYISIAKNKRYMMMIGDGINQTVVTGNRSVVDGWTTFNSATFAVTAPNFVAVNMTFRN TAGPEKHQAVALRSGADFSIFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVFQNCNLYPRKPMPNQFNAITAQGRSDPNQNTGTSIHNCT IRPADDLVSSNYTVKTYLGRPWKEYSRTVYMQSYIDGFLEPVGWREWNGDFALSTLYYAEYNNTGPGSNTTNRVTWPGYHVINSTEAANFTIT |
Full Sequence |
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Protein Sequence Length: 578 Download |
MDSPILILIT LSFFLQSLLL VSSQSLSNSS TICKTTPDPK YCKTVFPHSQ GNVQQYGRFS 60 IRKSLSQSRK FIRTVDKYIK RNAHVSQPAV IRALQDCRFL AGLTMDYLLT SFETVNDTSA 120 RSSFKALPFP KADDVQTLLS AALTNEQTCL EGLTTAASSS ATWTVRNGVA LPLVNDTKLL 180 GVSLALFTKG WVPKKKKRAA GFAWAHSRSG SSTHTKPLRL FRNGALPLKM TEKTRAVYES 240 LSRRKLADGD GDDGSMVLIS DIVTVNQDGT GNFTNITAAI SAAPNNTDGS GGFFLIYVTA 300 GIYEEYISIA KNKRYMMMIG DGINQTVVTG NRSVVDGWTT FNSATFAVTA PNFVAVNMTF 360 RNTAGPEKHQ AVALRSGADF SIFYSCSFEA YQDTLYTHSL RQFYRECDVY GTVDFIFGNA 420 AVVFQNCNLY PRKPMPNQFN AITAQGRSDP NQNTGTSIHN CTIRPADDLV SSNYTVKTYL 480 GRPWKEYSRT VYMQSYIDGF LEPVGWREWN GDFALSTLYY AEYNNTGPGS NTTNRVTWPG 540 YHVINSTEAA NFTITGLFLE DDWIWKTGVP YTSGLIS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 3.0e-150 | 61 | 575 | 517 | + pectinesterase/pectinesterase inhibitor | ||
PLN02416 | PLN02416 | 9.0e-153 | 93 | 575 | 483 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 33 | 577 | 546 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 33 | 576 | 553 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
pfam01095 | Pectinesterase | 0 | 263 | 558 | 297 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL87311.1 | 0 | 1 | 577 | 1 | 573 | unknown protein [Arabidopsis thaliana] |
DDBJ | BAF00855.1 | 0 | 1 | 577 | 1 | 579 | hypothetical protein [Arabidopsis thaliana] |
RefSeq | NP_563662.1 | 0 | 1 | 577 | 1 | 579 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_567227.1 | 0 | 1 | 577 | 1 | 573 | ATPMEPCRB; pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002523112.1 | 0 | 14 | 576 | 23 | 566 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 265 | 575 | 7 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 263 | 575 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3uw0_A | 8e-20 | 273 | 432 | 44 | 220 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 8e-19 | 273 | 511 | 18 | 284 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 8e-19 | 273 | 511 | 18 | 284 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |