| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10011914m |
| Family | GH9 |
| Protein Properties | Length: 502 Molecular Weight: 55528.9 Isoelectric Point: 8.4121 |
| Chromosome | Chromosome/Scaffold: 1 Start: 646463 End: 649127 |
| Description | cellulase 2 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 43 | 496 | 0 |
| NYKDALSKSILFFEGQRSGKLPPNQRMTWRSNSGLSDGSALNVDLVGGYYDAGDNMKFGFPMAFTTTMLSWSLIEFGGLMKSELPNAKEAVRWATDFLLK ATSHPDTIYVQVGDPNMDHACWERPEDMDTPRSVFKVDKNNPGSDIAGETAAALAAASIVFRKCDPSYSNLLLQRAITVFAFADKYRGPYSAGLAPEVCP FYCSYSGYQDELLWGAAWLHKATNKPTYLNYIKANGQILGADEFDNMFSWDNKHVGARILLSKEFLIQKVKSLEEYKEHADSFICSVLPGASSSQYTPGG LLFKLGESNMQYVTSTSFLLLTYAKYLTSARTVAYCGGSVVTPARLRSIAKKQVDYVLGDNPMKMSYMVGYGPKYPRRIHHRGSSLPSVAAHPSKIQCHD GFSMYTSQSPNPNDLVGAVVGGPDHNDQFPDERSDYGRSEPATYINAPLVGALA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 502 Download |
| MTFLFSPSRL IFLLSFFLLL SNGFSSSSSR RGIHRRHHLD NHNYKDALSK SILFFEGQRS 60 GKLPPNQRMT WRSNSGLSDG SALNVDLVGG YYDAGDNMKF GFPMAFTTTM LSWSLIEFGG 120 LMKSELPNAK EAVRWATDFL LKATSHPDTI YVQVGDPNMD HACWERPEDM DTPRSVFKVD 180 KNNPGSDIAG ETAAALAAAS IVFRKCDPSY SNLLLQRAIT VFAFADKYRG PYSAGLAPEV 240 CPFYCSYSGY QDELLWGAAW LHKATNKPTY LNYIKANGQI LGADEFDNMF SWDNKHVGAR 300 ILLSKEFLIQ KVKSLEEYKE HADSFICSVL PGASSSQYTP GGLLFKLGES NMQYVTSTSF 360 LLLTYAKYLT SARTVAYCGG SVVTPARLRS IAKKQVDYVL GDNPMKMSYM VGYGPKYPRR 420 IHHRGSSLPS VAAHPSKIQC HDGFSMYTSQ SPNPNDLVGA VVGGPDHNDQ FPDERSDYGR 480 SEPATYINAP LVGALAYLAR S* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02266 | PLN02266 | 0 | 34 | 501 | 471 | + endoglucanase | ||
| PLN02308 | PLN02308 | 0 | 41 | 499 | 461 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 43 | 496 | 461 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 0 | 40 | 499 | 465 | + cellulase | ||
| PLN02613 | PLN02613 | 0 | 39 | 498 | 466 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC16418.1 | 0 | 1 | 501 | 1 | 501 | endo-1,4-beta glucanase [Arabidopsis thaliana] |
| RefSeq | NP_171779.1 | 0 | 1 | 501 | 1 | 501 | ATCEL2; cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_192138.1 | 0 | 9 | 501 | 15 | 512 | AtGH9B13 (Arabidopsis thaliana glycosyl hydrolase 9B13); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002301487.1 | 0 | 34 | 501 | 37 | 507 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002320998.1 | 0 | 1 | 501 | 1 | 506 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 42 | 498 | 3 | 428 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1ksc_A | 0 | 42 | 498 | 3 | 428 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1ks8_A | 0 | 42 | 498 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 43 | 501 | 5 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 43 | 501 | 5 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
