| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10012178m |
| Family | CE16 |
| Protein Properties | Length: 273 Molecular Weight: 30068.3 Isoelectric Point: 5.3808 |
| Chromosome | Chromosome/Scaffold: 1 Start: 7014630 End: 7015745 |
| Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE16 | 28 | 261 | 1.2e-22 |
| FASGGSGFDPLTPIVVSAIPMSNQLTYFQEYIEKVKGFVGKEKAEYIISQGLAIVVAGSDDLANTYYGEHLEEFLYDIDSYTSFMANSAASFAMQLYESG ARKIGFIGVSPIGCIPIQRTTRGGRTRKCAKELNFAAQLFNSKLSTSLNALAQTLKNSTLVYIDIYASFADMIQNPQKYGFDEIGRGCCGTGLFELGPLC NKYTSFLCKNVSSYMFWDSYHPTERAYKILSQKF | |||
| Full Sequence |
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| Protein Sequence Length: 273 Download |
| DYLGVKPVLP AYLTPGLTKE DLLTGVSFAS GGSGFDPLTP IVVSAIPMSN QLTYFQEYIE 60 KVKGFVGKEK AEYIISQGLA IVVAGSDDLA NTYYGEHLEE FLYDIDSYTS FMANSAASFA 120 MQLYESGARK IGFIGVSPIG CIPIQRTTRG GRTRKCAKEL NFAAQLFNSK LSTSLNALAQ 180 TLKNSTLVYI DIYASFADMI QNPQKYGFDE IGRGCCGTGL FELGPLCNKY TSFLCKNVSS 240 YMFWDSYHPT ERAYKILSQK FVENDMGPFY EK* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam00657 | Lipase_GDSL | 5.0e-10 | 71 | 261 | 201 | + GDSL-like Lipase/Acylhydrolase. |
| COG3240 | COG3240 | 1.0e-11 | 146 | 259 | 114 | + Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] |
| cd01846 | fatty_acyltransferase_like | 2.0e-25 | 7 | 263 | 263 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. |
| PLN03156 | PLN03156 | 9.0e-72 | 3 | 269 | 267 | + GDSL esterase/lipase; Provisional |
| cd01837 | SGNH_plant_lipase_like | 4.0e-103 | 1 | 265 | 265 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006629 | lipid metabolic process |
| GO:0016788 | hydrolase activity, acting on ester bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF79901.1 | 0 | 1 | 271 | 720 | 966 | AC022472_10 Contains similarity to an unknown mRNA from Triticum sativum gb |
| GenBank | AAM64323.1 | 0 | 1 | 271 | 131 | 401 | anter-specific proline-rich protein APG precursor, putative [Arabidopsis thaliana] |
| RefSeq | NP_001117317.1 | 0 | 1 | 264 | 114 | 381 | hydrolase, acting on ester bonds / lipase [Arabidopsis thaliana] |
| RefSeq | NP_564104.1 | 0 | 1 | 271 | 131 | 401 | family II extracellular lipase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002510573.1 | 0 | 3 | 270 | 440 | 707 | zinc finger protein, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EV569427 | 256 | 1 | 256 | 0 |
| FD532319 | 250 | 7 | 256 | 0 |
| FD563608 | 258 | 1 | 258 | 0 |
| EV571086 | 235 | 39 | 273 | 0 |
| EV550148 | 231 | 43 | 273 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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