| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10012537m |
| Family | CE8 |
| Protein Properties | Length: 116 Molecular Weight: 12810.4 Isoelectric Point: 10.1178 |
| Chromosome | Chromosome/Scaffold: 1 Start: 15390681 End: 15391167 |
| Description | pectinesterase 11 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 1 | 104 | 1.8e-28 |
| KCHLHSFSPNNGSITAQMRTSATEKSGFTFLGCKLTGSGSTYLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKQKGQRVKWSKQLSDDEATVFLSK DFIG | |||
| Full Sequence |
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| Protein Sequence Length: 116 Download |
| KCHLHSFSPN NGSITAQMRT SATEKSGFTF LGCKLTGSGS TYLGRPWGAY SRVVFAYSFF 60 SNVVAPQGWN QWGDSTKQKG QRVKWSKQLS DDEATVFLSK DFIGGKDWLR LQNCS* 120 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02665 | PLN02665 | 5.0e-30 | 14 | 109 | 113 | + pectinesterase family protein | ||
| PLN02773 | PLN02773 | 1.0e-30 | 2 | 111 | 130 | + pectinesterase | ||
| PLN02671 | PLN02671 | 1.0e-31 | 2 | 111 | 126 | + pectinesterase | ||
| PLN02682 | PLN02682 | 6.0e-42 | 1 | 111 | 127 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 2.0e-62 | 1 | 110 | 126 | + putative pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN79458.1 | 2.00386e-43 | 1 | 110 | 201 | 326 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI37658.1 | 5.00264e-43 | 1 | 110 | 219 | 344 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_179755.1 | 0 | 1 | 110 | 208 | 333 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002280496.1 | 2.00386e-43 | 1 | 110 | 162 | 287 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002512914.1 | 2e-40 | 1 | 110 | 199 | 324 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0.000000004 | 1 | 110 | 165 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0.000000005 | 2 | 110 | 170 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX283718 | 126 | 1 | 110 | 1.96182e-44 |
| EX278581 | 126 | 1 | 110 | 9.94922e-44 |
| AM839785 | 127 | 1 | 110 | 9e-38 |
| DR788341 | 128 | 2 | 113 | 1e-37 |
| FL164690 | 128 | 2 | 113 | 1e-37 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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