CAZyme Information

Basic Information
SpeciesCapsella rubella
Cazyme IDCarubv10012587m
FamilyCBM57
Protein PropertiesLength: 990 Molecular Weight: 108405 Isoelectric Point: 6.5703
ChromosomeChromosome/Scaffold: 1 Start: 19554405 End: 19559992
DescriptionLeucine-rich repeat transmembrane protein kinase
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CBM573865562e-25
  SINCGGPEIRSVSGAVFEREDEDLGPASFAISDGQRWAASSVGLFAGSSSNIYKATSQSQFVNTLDSELFQSARLSASSLRYYGLGLENGGYTVNLQFAE
  IQILGSTSNTWKGLGRRRFDIYVQGRLVEKDFDVRRTAGDSTVRAVQKQYKANVSENHLEIHLFWAGKGTC
Full Sequence
Protein Sequence     Length: 990     Download
RALNSIFAAW RIRAPREWNI SGELCSGAAI DDSVLDNNPA YNPLIKCDCT FENSTICRIT    60
NIKVYAKEVV GTIPEELWTL KYLTNLNLGQ NVLTGSLPPA IGNLTRMQWM TFGINALSGP    120
VPKEIGLLTD LRLLSISSNN FSGSIPDEIG NCAKLQQIYI DSSGLSGRIP LSFANLVDLE    180
QAWLADLEVT GQIPDFIGKW TKLTTLRILG TGLSGPIPSS FSNLTSLTEL RLGDISNGSS    240
SLEFIKDMKS LSILVLRNSN LTGTIPSKIG EYSSLQQVDL SFNKLHGPIP APLFNLSRLT    300
HLFLGNNTFN GSLPTQKTQS LSYIDVSYND LSGSLPSWAS LPNLKLNLIA NNFTLEGLNN    360
GVLPGLSCLQ KNFPCNRGKG IYSDFSINCG GPEIRSVSGA VFEREDEDLG PASFAISDGQ    420
RWAASSVGLF AGSSSNIYKA TSQSQFVNTL DSELFQSARL SASSLRYYGL GLENGGYTVN    480
LQFAEIQILG STSNTWKGLG RRRFDIYVQG RLVEKDFDVR RTAGDSTVRA VQKQYKANVS    540
ENHLEIHLFW AGKGTCCIPI QGAYGPLISA VSATPDFTPT VGNRPPSRGN NRTGLIVGVI    600
VGVGVLSIFA GVAIFIIRKK RRQYTDDEEI LSMDVKPFTF TYSELKSATQ DFDPSNKLGE    660
GGFGPVYKGK LNDGREVAVK LLSVGSRQGK GQFVAEIVAI SAVQHRNLVK LYGCCYEGDH    720
RLLVYEYLPN GSLDQALFGE KTLHLDWSTR YEICLGVARG LVYLHEEARL RIVHRDVKAS    780
NILLDSKLVP KVSDFGLAKL YDDKKTHIST RVAGTIGYLA PEYAMRGHLT EKIDVYAFGV    840
VALELVSGRP NSDENLEDEK RYLLEWAWNL HEKSREVELI DHELTEFNME EVKRMIGIAL    900
LCTQTSHALR PPMSRVVAML SGDVEVSDVK SKPGYLTDWR FDDTTGSSLS GFQTKDTGVS    960
ESFTSFVAPG SEGNNDSKPM LGAHINEGR* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00192PTKc7.0e-48656847207+
cd00180PKc7.0e-50658875222+
smart00221STYKc4.0e-50657875246+
smart00219TyrKc4.0e-51657875246+
pfam11721Malectin2.0e-53385571189+
Gene Ontology
GO TermDescription
GO:0004672protein kinase activity
GO:0005515protein binding
GO:0005524ATP binding
GO:0006468protein phosphorylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAG50909.10194324952AC069159_10 receptor protein kinase, putative [Arabidopsis thaliana]
GenBankAAG50909.101198910812062AC069159_10 receptor protein kinase, putative [Arabidopsis thaliana]
Swiss-ProtC0LGH302989431033Y5614_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g56140; Flags: Precursor
RefSeqNP_176009.101989431032leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana]
RefSeqNP_564709.102989431032leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3ulz_A064092320309A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose
PDB3uim_A064092320309A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation
PDB3tl8_H064092328317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_G064092328317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_D064092328317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
Transmembrane Domains
StartEnd
595617
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EE5632392526919420
FY4462232526939420
GR4523302576909450
DK5281832893966840
EY8967172357389720
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00368.2Aquca_030_00368.1
Arabidopsis lyrata883240.424.594883240.424.594892639892640892638
Arabidopsis thalianaAT1G56130.1AT1G56140.1AT1G56120.1AT1G56145.2AT1G56145.1
Brachypodium distachyonBradi5g21870.2Bradi5g21857.1Bradi3g17756.2Bradi3g17756.1Bradi1g48230.1
Brassica rapaBra003333Bra007909Bra007908Bra030813Bra030815
Bra033670Bra035966Bra033958Bra007907Bra016226
Carica papayaevm.model.supercontig_2207.1evm.model.supercontig_748.4
Capsella rubellaCarubv10008172mCarubv10010895mCarubv10008256mCarubv10008071m.409.563Carubv10008071m.409.563
Carubv10008183m
Citrus clementinaCiclev10007054mCiclev10007687mCiclev10007686mCiclev10018029mCiclev10018038m
Ciclev10014641mCiclev10014117m
Citrus sinensisorange1.1g001658morange1.1g008072morange1.1g006515morange1.1g006206morange1.1g004413m
orange1.1g002562morange1.1g002581morange1.1g038019m
Cucumis sativusCucsa.239700.2Cucsa.239700.1
Eucalyptus grandisEucgr.F04434.2Eucgr.F04434.1Eucgr.F04306.1Eucgr.F04441.1Eucgr.F02391.1
Eucgr.F04436.1Eucgr.C02767.1Eucgr.L01594.1Eucgr.F04301.1Eucgr.L01787.1
Eucgr.B01468.1Eucgr.F04437.1
Fragaria vescamrna11624.1-v1.0-hybridmrna16334.1-v1.0-hybridmrna30033.1-v1.0-hybridmrna28048.1-v1.0-hybrid
Glycine maxGlyma09g15200.3Glyma09g15200.2Glyma09g15200.1Glyma08g25590.2Glyma08g25600.2
Glyma08g25600.1
Gossypium raimondiiGorai.002G105800.1Gorai.001G034000.1Gorai.011G052100.1Gorai.N011200.1Gorai.011G052400.2
Gorai.011G052400.1Gorai.001G131900.1Gorai.006G091400.1Gorai.011G052300.5Gorai.011G052300.4
Gorai.011G052300.3Gorai.011G052300.2Gorai.011G052300.1Gorai.011G052000.1Gorai.011G052600.8
Gorai.011G052600.7Gorai.011G052600.6Gorai.011G052600.5Gorai.011G052600.4Gorai.011G052600.3
Gorai.011G052600.2Gorai.011G052600.1
Linum usitatissimumLus10031199
Malus domesticaMDP0000210289MDP0000183693.203.372MDP0000183693.203.372MDP0000213902MDP0000251746
MDP0000269684MDP0000267728MDP0000281046MDP0000207688MDP0000183693.772.939
MDP0000183693.772.939MDP0000389758MDP0000278907MDP0000306337MDP0000384033
MDP0000171164MDP0000307776MDP0000212717MDP0000311945MDP0000308237
MDP0000283397MDP0000122720
Manihot esculentacassava4.1_001509mcassava4.1_001407mcassava4.1_025733mcassava4.1_030674m
Mimulus guttatusmgv1a002601mmgv1a018669mmgv1a000612m
Oryza sativaLOC_Os04g22470.1LOC_Os08g10300.1LOC_Os08g10290.1LOC_Os04g52640.3LOC_Os04g52640.2
LOC_Os04g52640.1LOC_Os04g52600.1LOC_Os04g52630.1LOC_Os05g17810.1LOC_Os04g52614.1
LOC_Os08g10330.1LOC_Os05g17604.6LOC_Os05g17604.5LOC_Os05g17604.4LOC_Os05g17604.3
LOC_Os05g17604.2LOC_Os05g17604.1LOC_Os05g16430.1LOC_Os08g10320.3LOC_Os08g10320.2
LOC_Os08g10320.1LOC_Os08g10310.3LOC_Os08g10310.2LOC_Os08g10310.1LOC_Os04g52606.1
LOC_Os05g16930.1LOC_Os06g07130.1LOC_Os04g52590.1LOC_Os08g10250.1LOC_Os05g16824.4
LOC_Os05g16824.3LOC_Os05g16824.2LOC_Os05g16824.1LOC_Os05g16740.1
Panicum virgatumPavirv00010367mPavirv00021132mPavirv00063388mPavirv00039446mPavirv00006527m
Pavirv00041471mPavirv00039639mPavirv00031150mPavirv00014784mPavirv00036213m
Pavirv00070332mPavirv00032467mPavirv00022623mPavirv00048042m
Physcomitrella patensPp1s244_27V6.2
Phaseolus vulgarisPhvul.011G169300.1
Picea abiesMA_170647g0010MA_162469g0010MA_73800g0010MA_8849269g0010MA_18275g0010
MA_17053g0010MA_954053g0010MA_54077g0010MA_10436782g0010MA_404302g0010
MA_461914g0010
Populus trichocarpaPotri.006G255100.2Potri.018G026800.2Potri.018G026800.1Potri.006G255100.1Potri.001G082900.5
Potri.001G082900.4Potri.001G082900.3Potri.001G082900.2Potri.001G082900.1Potri.003G148000.3
Potri.003G148000.2Potri.003G148000.1Potri.007G067900.3Potri.007G067900.2Potri.007G067900.1
Prunus persicappa017326mppa017049mppa001211mppa001152mppa000802m
ppa015982mppa026535m
Ricinus communis29848.m00461730169.m00632829497.m00008929624.m000325
Setaria italicaSi013203mSi013191mSi013178mSi009240mSi012655m
Si009468mSi009463mSi009322mSi028769mSi028790m
Si009325mSi009466mSi009259mSi006097m
Selaginella moellendorffii438852
Sorghum bicolorSb07g005820.1Sb06g028570.1Sb06g028560.1Sb10g004730.1
Thellungiella halophilaThhalv10012006mThhalv10018064mThhalv10011215mThhalv10016280mThhalv10016175m
Thhalv10019658mThhalv10012222m
Vitis viniferaGSVIVT01037993001.434.602GSVIVT01037993001.434.602GSVIVT01035865001GSVIVT01013621001GSVIVT01029720001.503.674
GSVIVT01029720001.503.674GSVIVT01037982001GSVIVT01038011001GSVIVT01013608001GSVIVT01013612001
GSVIVT01029718001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)