Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10012900m |
Family | GT41 |
Protein Properties | Length: 968 Molecular Weight: 108964 Isoelectric Point: 6.8015 |
Chromosome | Chromosome/Scaffold: 3 Start: 1135318 End: 1142231 |
Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT41 | 457 | 745 | 0 |
RPTMAEAHANLASAYKDSGHVEAAITSYKQALLLRPDFPEATCNLLHTLQCVCCWEDRSKMFAEVESIIRRQINMSVLPSVQPFHAIAYPIDPILALEIS RKYAAHCSIIASRFGLPPFTHPAGLPVKLEGGFKRLRIGYVSSDFGNHPLSHLMGSVFGMHNRENVEVFCYALSANDNTEWRQRIQSEAEHFLDVSAMPS DAIAKIINEDKIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGATYIDYLVTDEFVSPLQYAHIYSEKLVHLPHCYFVNDYKQ | |||
GT41 | 754 | 955 | 0 |
NSKPKRSDYGLPEDKFIFACFNQLYKMDPEIVNTCALWLLRFPAAGEMRFRTYAAAQGVQPDQIIFTDVAMKSEHIRRSVLADVILDTPLCNGHTTGTDV LWAGVPMITLPLEKMATRVAGSLCLATGLGHEMIVNSLEEYEEKSVSLALNKPKLEALTKELRASRLTCPLFDTTRWVKNLERSYFKMWNIHCSGQQPQH FK |
Full Sequence |
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Protein Sequence Length: 968 Download |
MISSKNGAAM ISRPVFLSDR VDEVFSRKLD LSVSSSSSSS LLQQFNKTHE GDDDARLGLA 60 HQLYKAGEFK QALEHSNMVY QRNPLRTDNL LLIGAIYYQL QEYDMCIARN EEALRIQPQF 120 AECYGNMANA WKEKGDTDRA IRYYLIAIEL RPNFADAWSN LASAYMRKGR LSEATQCCQQ 180 ALSLNPLLVD AHSNLGNLMK AQGLIHEAYS CYLEAVRIQP TFAIAWSNLA GLFMESGDLN 240 RALQYYKEAV KLKPAFPDAY LNLGNVYKAL GRPTEAIMCY QHALQMRPNC AMAFGNIASI 300 YYEQGQLDLA IRHYKQAISR DPRFLEAYNN LGNALKDIGR VDEAIRCYNQ CLALQPNHPQ 360 AMANLGNIYM EWNMMGPASS LFKATLAVTT GLSAPFNNLA IIYKQQGNYS DAISCYNEVL 420 RIDPLAADAL VNRGNTYKEI GRVTEAIQDY MHAITFRPTM AEAHANLASA YKDSGHVEAA 480 ITSYKQALLL RPDFPEATCN LLHTLQCVCC WEDRSKMFAE VESIIRRQIN MSVLPSVQPF 540 HAIAYPIDPI LALEISRKYA AHCSIIASRF GLPPFTHPAG LPVKLEGGFK RLRIGYVSSD 600 FGNHPLSHLM GSVFGMHNRE NVEVFCYALS ANDNTEWRQR IQSEAEHFLD VSAMPSDAIA 660 KIINEDKIQI LINLNGYTKG ARNEIFAMQP APIQVSYMGF PGTTGATYID YLVTDEFVSP 720 LQYAHIYSEK LVHLPHCYFV NDYKQKNQDV LDPNSKPKRS DYGLPEDKFI FACFNQLYKM 780 DPEIVNTCAL WLLRFPAAGE MRFRTYAAAQ GVQPDQIIFT DVAMKSEHIR RSVLADVILD 840 TPLCNGHTTG TDVLWAGVPM ITLPLEKMAT RVAGSLCLAT GLGHEMIVNS LEEYEEKSVS 900 LALNKPKLEA LTKELRASRL TCPLFDTTRW VKNLERSYFK MWNIHCSGQQ PQHFKVLEND 960 LEFPHDR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam13844 | Glyco_transf_41 | 7.0e-72 | 592 | 761 | 176 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
COG3914 | Spy | 2.0e-90 | 397 | 944 | 569 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_187074.1 | 0 | 1 | 967 | 1 | 977 | SEC (secret agent); transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002270163.1 | 0 | 11 | 967 | 23 | 986 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319130.1 | 0 | 52 | 964 | 1 | 923 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325368.1 | 0 | 105 | 967 | 1 | 873 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522031.1 | 0 | 49 | 967 | 51 | 979 | o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4gz6_D | 0 | 356 | 743 | 6 | 390 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 4gz6_D | 0 | 759 | 954 | 514 | 718 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 4gz6_D | 2e-29 | 118 | 265 | 6 | 153 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 4gz6_D | 7e-27 | 186 | 428 | 6 | 246 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 4gz6_D | 3e-25 | 152 | 298 | 6 | 152 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO795247 | 463 | 516 | 968 | 0 |
HO778725 | 450 | 529 | 968 | 0 |
HO798232 | 454 | 7 | 460 | 0 |
HO798232 | 367 | 126 | 492 | 0 |
HO795247 | 52 | 466 | 517 | 4e-20 |
Sequence Alignments (This image is cropped. Click for full image.) |
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