| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10012912m |
| Family | GH116 |
| Protein Properties | Length: 951 Molecular Weight: 105995 Isoelectric Point: 7.1517 |
| Chromosome | Chromosome/Scaffold: 3 Start: 8976413 End: 8983099 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH116 | 535 | 897 | 0 |
| GRFLYLEGVEYVMWCTYDVHFYASYALLMLFPKIELNIQRDFAKAVLSEDGRKVKFLAEGNVGIRKVRGAVPHDLGMHDPWNEMNAYNIHDTSKWKDLNP KFVLQVYRDFAATGDYQFGIDVWPAVRAAMEYMEQFDRDNDDLIENDGFPDQTYDTWTVHGVSAYCGCLWLAALQAAAAMALQIGDKFFAELCKNKFLNA KAALEKKLWNGSYFNYDSGASSNSKSIQTDQLAGQWYAASSGLPPIFEESKIKSTMQKIFDFNVMKTKGGKMGAVNGMHPDGKVDDTCMQSREIWTGVTY AAAATMILSGMEEQGFTTAEGIFTAGWSEEGFGYWFQTPEGWTTDGHYRSLIYMRPLAIWGMQ | |||
| Full Sequence |
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| Protein Sequence Length: 951 Download |
| MVGATLFHRR KHSWPPEEFI SRSTLQLLDF DSAAPPAHAW RRKLNCHANL LKEFTITFRE 60 AIKMVRLGIR LWSYVREEAS HGRKAPIDPF TKENCKPSAS QGVPLGGMGS GSISRGFRGE 120 FKQWQITPGT CDPSPMMSNQ FSIFISRDGG HKKYASVLSP GQHGSLRKSH DKGISSWGWN 180 LNGQHSTYHA LFPRAWTIYD GEPDPELKIS CRQISPFIPN NYRDSSLPAA VFVYTLVNTG 240 KERAKVSLLF TWANSMGGTS HMSGGHVNEP FIGEDGVSGV LLHHKTGKGN PPVTFAVAAS 300 ETQNVNVTVL PCFGLSEDSS FTAKDMWDTM EKDGKFDQEN FNSGPSTPSL AGDTICAAVS 360 ASAWVEAHGK CTVSFALSWS SPKVKFSKGS TYDRRYTKFY GTSPRAALDL VHDALTNYKR 420 WEEDIEAWQN PILRDERLPE WYKFTLFNEL YFLVAGGTVW IDSASLDSNR SSHHQQSGFG 480 NSDGKASGLD INDQHNNLGN GNSVGTKSNG EVSAIHNRNG LFVDTRHVDD GDDVGRFLYL 540 EGVEYVMWCT YDVHFYASYA LLMLFPKIEL NIQRDFAKAV LSEDGRKVKF LAEGNVGIRK 600 VRGAVPHDLG MHDPWNEMNA YNIHDTSKWK DLNPKFVLQV YRDFAATGDY QFGIDVWPAV 660 RAAMEYMEQF DRDNDDLIEN DGFPDQTYDT WTVHGVSAYC GCLWLAALQA AAAMALQIGD 720 KFFAELCKNK FLNAKAALEK KLWNGSYFNY DSGASSNSKS IQTDQLAGQW YAASSGLPPI 780 FEESKIKSTM QKIFDFNVMK TKGGKMGAVN GMHPDGKVDD TCMQSREIWT GVTYAAAATM 840 ILSGMEEQGF TTAEGIFTAG WSEEGFGYWF QTPEGWTTDG HYRSLIYMRP LAIWGMQWAL 900 SLPKAILDAP QINMMDRVHL SPRSRRFSHN VKVVKHKAKC FGNSALSCSC * 960 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 3.0e-30 | 102 | 462 | 365 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 5.0e-64 | 102 | 421 | 333 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 5.0e-69 | 532 | 900 | 390 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 8.0e-155 | 535 | 898 | 368 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01359.1 | 0 | 1 | 950 | 1 | 937 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_189060.2 | 0 | 1 | 950 | 1 | 950 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002285674.1 | 0 | 1 | 950 | 1 | 978 | PREDICTED: similar to catalytic [Vitis vinifera] |
| RefSeq | XP_002303825.1 | 0 | 1 | 950 | 1 | 966 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518119.1 | 0 | 1 | 950 | 1 | 968 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO779860 | 279 | 677 | 951 | 0 |
| HO779860 | 150 | 529 | 678 | 0 |
| EX126394 | 285 | 605 | 889 | 0 |
| GT045992 | 335 | 601 | 935 | 0 |
| HO779860 | 61 | 416 | 476 | 3e-19 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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