| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10012956m |
| Family | GT20 |
| Protein Properties | Length: 872 Molecular Weight: 98850.6 Isoelectric Point: 6.5109 |
| Chromosome | Chromosome/Scaffold: 3 Start: 13960606 End: 13966555 |
| Description | trehalose phosphatase/synthase 11 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT20 | 56 | 544 | 0 |
| PKRIVVSNQLPLRAHRDISSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPSEQEDVSQFLLENFQCVPTFLPSDLLDKYYHGFCKHYLWPIF HYLLPMTQAQGSLFDRSNWRAYTTVNKIFADKIFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSEIYRTLPVRDEILKGFLNCDLV GFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTVSIKILPVGIHMGQIETIKASEETAEKVKGLRERFKGNTVMLGVDDLDMFKGISLKFWAMGQ LLEQNEELRGKVVLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFVNGPVSTLDKVAYYAISECVVVNAVRDGMNLVPYKYTVTRQGS PALDAALGFGEDDVRKSVIIVSEFIGCSPSLSGAIRVNPWNIDAVTDAMSSAMTMSDKEKNLRHQKHHKYIISHNVAYWARSYDQDLQR | |||
| Full Sequence |
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| Protein Sequence Length: 872 Download |
| MSPESWKDQL SLVSSDDYRI MGRHRIPNAV TKLSGLETDD GDGIIDSSGG AWVSKPKRIV 60 VSNQLPLRAH RDISSNKWCF EFDNDSLYLQ LKDGFPPETE VVYVGSLNAD VLPSEQEDVS 120 QFLLENFQCV PTFLPSDLLD KYYHGFCKHY LWPIFHYLLP MTQAQGSLFD RSNWRAYTTV 180 NKIFADKIFE VLNPDDDYVW IHDYHLMILP TFLRNRFHRI KLGIFLHSPF PSSEIYRTLP 240 VRDEILKGFL NCDLVGFHTF DYARHFLSCC SRMLGLDYES KRGYIGLEYF GRTVSIKILP 300 VGIHMGQIET IKASEETAEK VKGLRERFKG NTVMLGVDDL DMFKGISLKF WAMGQLLEQN 360 EELRGKVVLV QITNPARSSG KDVQDVEKQI NLIADEINSK FGRPGGYKPI VFVNGPVSTL 420 DKVAYYAISE CVVVNAVRDG MNLVPYKYTV TRQGSPALDA ALGFGEDDVR KSVIIVSEFI 480 GCSPSLSGAI RVNPWNIDAV TDAMSSAMTM SDKEKNLRHQ KHHKYIISHN VAYWARSYDQ 540 DLQRACKDHF NKRFWGVGFG LFFKVVALDP NFRKLCVETI VPAYRRTSSR LILLDYDGTM 600 MDQDTLDKKP SDGLISLLNR LCDDPNNLVF IVSGRGKDPL SKWFDSCPKL GLSAEHGYFT 660 RWNSSSSWET SELPADLSWK TIAKPVMNHY MEATDGSFIE EKESAMVWHH HEADHSFGSW 720 QAKELLDHLE SVLTNEPVVV KRGQHIVEVK PQGVSKGKVV EHLIATMRNT KGKKPDFLLC 780 IGDDRSDEDM FDSIVKHQDV SSIGLAEVFA CTVGQKPSKA KYYLDETSSV ITMLEWLASA 840 SDGSKHEQQQ KQSKITFQQP MGQCRNESID L* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03063 | PLN03063 | 6.0e-161 | 55 | 842 | 824 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
| PLN02205 | PLN02205 | 0 | 1 | 842 | 852 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
| pfam00982 | Glyco_transf_20 | 0 | 56 | 544 | 493 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
| PRK14501 | PRK14501 | 0 | 59 | 840 | 788 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
| cd03788 | GT1_TPS | 0 | 57 | 543 | 487 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005992 | trehalose biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF98176.1 | 0 | 10 | 841 | 7 | 846 | trehalose-6-phosphate synthase [Solanum lycopersicum] |
| RefSeq | NP_179460.1 | 0 | 1 | 868 | 1 | 862 | ATTPS11; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002308438.1 | 0 | 1 | 846 | 1 | 845 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002325087.1 | 0 | 12 | 845 | 1 | 826 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002533178.1 | 0 | 53 | 841 | 4 | 792 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wtx_D | 0 | 139 | 544 | 73 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 2wtx_C | 0 | 139 | 544 | 73 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 2wtx_B | 0 | 139 | 544 | 73 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 2wtx_A | 0 | 139 | 544 | 73 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 1gz5_D | 0 | 139 | 544 | 72 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777775 | 780 | 67 | 842 | 0 |
| HO779327 | 514 | 98 | 611 | 0 |
| HO779327 | 236 | 607 | 841 | 0 |
| HO797286 | 472 | 373 | 844 | 0 |
| HO795511 | 475 | 371 | 844 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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