CAZyme Information

Basic Information
SpeciesCapsella rubella
Cazyme IDCarubv10013046m
FamilyAA3
Protein PropertiesLength: 745 Molecular Weight: 81462.4 Isoelectric Point: 7.9339
ChromosomeChromosome/Scaffold: 3 Start: 8630403 End: 8633744
Descriptionfatty alcohol oxidase 3
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
AA32027432.8026e-45
  ETEETLLESLARKCLQTDHDVDNDAIRIKCDAVVVGSGSGGGVAASVLAKSGLKVVVLEKGSYYTPSEYLPFEGPGMDKLYENGGILPSVDGNIMVLAGA
  TVGGGSAVNWSACIKTPKTVLQEWSEDQKIPFFGTKEYVLAMEAVWERMGVTEKCEMESLQNQVLRKGCENLGFNVENVPRNSSEKHYCGSCGYGCRQGD
  KKGSDRTWLVDAVSHGAVILTGSKAERFILEKNCSNKGGKKMKCLGVVAKSLNGNIEKKIKIEAKVTVSAGGALLTPPLMISSGLRNRHIGRNLHLHPVL
  MAWGYFPDKASSNFNIKGKSYEGGIITSVSKVLSEDSEVRAIIETPALGPGSFSVLCPWTSGLDMKKRMARYSRTANLITIVRDRGSGEVKTEGRISYVV
  DKTDRDNIKAGLRQSLRILIAAGAEEVGTHRSDGQRLICKGVDEDSIQEFLDAVSTEEGPKGMTEKWNVYSSAHQMGSCRIGENEKEGAIDLNGESWEAE
  KLFVCDASALPSAVGVNPMITVMSTAYCISTRIAKSMTTDLY
Full Sequence
Protein Sequence     Length: 745     Download
MGKHRIAGKY GLRDITAAEM ETLASFCEAV LPPVPPPPEE ISGDSNHRNK EALRSFYSTS    60
GSQTPVLRQS IELITKRGTI EAYLVTRLIL FLLATRIGTL LICGTECLVS RWPFVEKFSE    120
LSLEKRERVL QKQFRNWFLT PVRAGFVYIK VAILFCFFSR VSPNGENSAW EAIGYKVNLD    180
ENKPETHKAR PLEKGIVETM NETEETLLES LARKCLQTDH DVDNDAIRIK CDAVVVGSGS    240
GGGVAASVLA KSGLKVVVLE KGSYYTPSEY LPFEGPGMDK LYENGGILPS VDGNIMVLAG    300
ATVGGGSAVN WSACIKTPKT VLQEWSEDQK IPFFGTKEYV LAMEAVWERM GVTEKCEMES    360
LQNQVLRKGC ENLGFNVENV PRNSSEKHYC GSCGYGCRQG DKKGSDRTWL VDAVSHGAVI    420
LTGSKAERFI LEKNCSNKGG KKMKCLGVVA KSLNGNIEKK IKIEAKVTVS AGGALLTPPL    480
MISSGLRNRH IGRNLHLHPV LMAWGYFPDK ASSNFNIKGK SYEGGIITSV SKVLSEDSEV    540
RAIIETPALG PGSFSVLCPW TSGLDMKKRM ARYSRTANLI TIVRDRGSGE VKTEGRISYV    600
VDKTDRDNIK AGLRQSLRIL IAAGAEEVGT HRSDGQRLIC KGVDEDSIQE FLDAVSTEEG    660
PKGMTEKWNV YSSAHQMGSC RIGENEKEGA IDLNGESWEA EKLFVCDASA LPSAVGVNPM    720
ITVMSTAYCI STRIAKSMTT DLYH* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam05199GMC_oxred_C5.0e-19596730135+
COG2303BetA3.0e-25249736544+
pfam00732GMC_oxred_N2.0e-93278500226+
Gene Ontology
GO TermDescription
GO:0009055electron carrier activity
GO:0016491oxidoreductase activity
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
GO:0050660flavin adenine dinucleotide binding
GO:0055114oxidation-reduction process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAC87643.10697442678alcohol oxidase [Arabidopsis thaliana]
EMBLCAN71289.10573813735hypothetical protein [Vitis vinifera]
RefSeqNP_566729.1017441746alcohol oxidase-related [Arabidopsis thaliana]
RefSeqXP_002285334.10573813735PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002314488.10207411716predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3t37_A0.00423048617281A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO79475373677350
HO7792244492146600
DK5349352464957400
FD9367622355067400
ES8156643543316830
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_089_00009.1Aquca_049_00132.1Aquca_034_00307.1Aquca_034_00304.1
Arabidopsis lyrata914728491906479855470376
Arabidopsis thalianaAT4G19380.1AT4G28570.1AT3G23410.1AT1G03990.1
Brachypodium distachyonBradi3g28677.1Bradi3g28657.1Bradi3g49085.1
Brassica rapaBra012548Bra024190Bra013391Bra015283Bra001912
Bra014947
Carica papayaevm.model.supercontig_165.33evm.model.supercontig_44.31evm.model.supercontig_2124.1
Capsella rubellaCarubv10004418mCarubv10004208mCarubv10012453mCarubv10004212m
Citrus clementinaCiclev10011111mCiclev10004403mCiclev10004405mCiclev10018992m
Citrus sinensisorange1.1g003990morange1.1g004496m
Cucumis sativusCucsa.037200.2Cucsa.037200.1Cucsa.035240.1Cucsa.255570.1
Eucalyptus grandisEucgr.H03017.2Eucgr.H03017.1Eucgr.H00753.1Eucgr.K02114.1Eucgr.D02566.1
Eucgr.D02568.1
Fragaria vescamrna08288.1-v1.0-hybridmrna11513.1-v1.0-hybridmrna08285.1-v1.0-hybrid
Glycine maxGlyma09g35210.2Glyma01g35620.1Glyma16g16415.1Glyma16g08300.2Glyma10g32640.2
Glyma12g15940.1Glyma19g34960.1Glyma06g42400.2Glyma03g32220.2
Gossypium raimondiiGorai.001G179800.3Gorai.001G179800.2Gorai.001G179800.1Gorai.011G177100.3Gorai.011G177100.2
Gorai.011G177100.1Gorai.006G252500.1
Linum usitatissimumLus10003621Lus10024922Lus10035673Lus10008239Lus10022903
Lus10037257Lus10011800
Malus domesticaMDP0000233110MDP0000173300MDP0000208936MDP0000197715
Manihot esculentacassava4.1_004067mcassava4.1_002349mcassava4.1_002619mcassava4.1_002379mcassava4.1_025870m
Medicago truncatulaMedtr5g025650.1Medtr8g072210.1Medtr4g081080.1Medtr1g075650.1Medtr4g080890.1
Mimulus guttatusmgv1a001761mmgv1a022390mmgv1a001868mmgv1a001883mmgv1a001896m
Oryza sativaLOC_Os10g33540.1LOC_Os10g33520.1LOC_Os10g33460.1LOC_Os02g40840.1
Panicum virgatumPavirv00054947m
Physcomitrella patensPp1s58_61V6.1Pp1s7_216V6.1Pp1s48_250V6.1Pp1s2_413V6.1
Phaseolus vulgarisPhvul.002G122600.1Phvul.003G278200.1Phvul.007G124200.1Phvul.001G162800.1Phvul.011G136600.1
Picea abiesMA_10427118g0010MA_9032943g0010MA_9483g0010MA_10427421g0010MA_242814g0010
Populus trichocarpaPotri.004G234900.2Potri.004G234900.1Potri.010G069100.1Potri.008G169300.1Potri.002G259700.1
Prunus persicappa014756mppa018458mppa021498m
Ricinus communis29827.m00265529981.m00058628492.m000467
Setaria italicaSi034362mSi034354mSi034359mSi016380m
Selaginella moellendorffii1140891168557460173531
Sorghum bicolorSb01g019470.1Sb01g019460.1Sb01g019480.1Sb04g026370.1Sb04g026390.1
Thellungiella halophilaThhalv10024717mThhalv10024496mThhalv10024528mThhalv10020141mThhalv10006882m
Vitis viniferaGSVIVT01036891001GSVIVT01027855001GSVIVT01028371001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)