| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10013046m |
| Family | AA3 |
| Protein Properties | Length: 745 Molecular Weight: 81462.4 Isoelectric Point: 7.9339 |
| Chromosome | Chromosome/Scaffold: 3 Start: 8630403 End: 8633744 |
| Description | fatty alcohol oxidase 3 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 202 | 743 | 2.8026e-45 |
| ETEETLLESLARKCLQTDHDVDNDAIRIKCDAVVVGSGSGGGVAASVLAKSGLKVVVLEKGSYYTPSEYLPFEGPGMDKLYENGGILPSVDGNIMVLAGA TVGGGSAVNWSACIKTPKTVLQEWSEDQKIPFFGTKEYVLAMEAVWERMGVTEKCEMESLQNQVLRKGCENLGFNVENVPRNSSEKHYCGSCGYGCRQGD KKGSDRTWLVDAVSHGAVILTGSKAERFILEKNCSNKGGKKMKCLGVVAKSLNGNIEKKIKIEAKVTVSAGGALLTPPLMISSGLRNRHIGRNLHLHPVL MAWGYFPDKASSNFNIKGKSYEGGIITSVSKVLSEDSEVRAIIETPALGPGSFSVLCPWTSGLDMKKRMARYSRTANLITIVRDRGSGEVKTEGRISYVV DKTDRDNIKAGLRQSLRILIAAGAEEVGTHRSDGQRLICKGVDEDSIQEFLDAVSTEEGPKGMTEKWNVYSSAHQMGSCRIGENEKEGAIDLNGESWEAE KLFVCDASALPSAVGVNPMITVMSTAYCISTRIAKSMTTDLY | |||
| Full Sequence |
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| Protein Sequence Length: 745 Download |
| MGKHRIAGKY GLRDITAAEM ETLASFCEAV LPPVPPPPEE ISGDSNHRNK EALRSFYSTS 60 GSQTPVLRQS IELITKRGTI EAYLVTRLIL FLLATRIGTL LICGTECLVS RWPFVEKFSE 120 LSLEKRERVL QKQFRNWFLT PVRAGFVYIK VAILFCFFSR VSPNGENSAW EAIGYKVNLD 180 ENKPETHKAR PLEKGIVETM NETEETLLES LARKCLQTDH DVDNDAIRIK CDAVVVGSGS 240 GGGVAASVLA KSGLKVVVLE KGSYYTPSEY LPFEGPGMDK LYENGGILPS VDGNIMVLAG 300 ATVGGGSAVN WSACIKTPKT VLQEWSEDQK IPFFGTKEYV LAMEAVWERM GVTEKCEMES 360 LQNQVLRKGC ENLGFNVENV PRNSSEKHYC GSCGYGCRQG DKKGSDRTWL VDAVSHGAVI 420 LTGSKAERFI LEKNCSNKGG KKMKCLGVVA KSLNGNIEKK IKIEAKVTVS AGGALLTPPL 480 MISSGLRNRH IGRNLHLHPV LMAWGYFPDK ASSNFNIKGK SYEGGIITSV SKVLSEDSEV 540 RAIIETPALG PGSFSVLCPW TSGLDMKKRM ARYSRTANLI TIVRDRGSGE VKTEGRISYV 600 VDKTDRDNIK AGLRQSLRIL IAAGAEEVGT HRSDGQRLIC KGVDEDSIQE FLDAVSTEEG 660 PKGMTEKWNV YSSAHQMGSC RIGENEKEGA IDLNGESWEA EKLFVCDASA LPSAVGVNPM 720 ITVMSTAYCI STRIAKSMTT DLYH* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam05199 | GMC_oxred_C | 5.0e-19 | 596 | 730 | 135 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 3.0e-25 | 249 | 736 | 544 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 2.0e-93 | 278 | 500 | 226 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016491 | oxidoreductase activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAC87643.1 | 0 | 69 | 744 | 2 | 678 | alcohol oxidase [Arabidopsis thaliana] |
| EMBL | CAN71289.1 | 0 | 5 | 738 | 13 | 735 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_566729.1 | 0 | 1 | 744 | 1 | 746 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002285334.1 | 0 | 5 | 738 | 13 | 735 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002314488.1 | 0 | 20 | 741 | 1 | 716 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.004 | 230 | 486 | 17 | 281 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794753 | 736 | 7 | 735 | 0 |
| HO779224 | 449 | 214 | 660 | 0 |
| DK534935 | 246 | 495 | 740 | 0 |
| FD936762 | 235 | 506 | 740 | 0 |
| ES815664 | 354 | 331 | 683 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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