Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10013078m |
Family | GH85 |
Protein Properties | Length: 711 Molecular Weight: 80698.8 Isoelectric Point: 5.9241 |
Chromosome | Chromosome/Scaffold: 3 Start: 3530732 End: 3534259 |
Description | Glycosyl hydrolase family 85 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH85 | 112 | 393 | 0 |
MKGGYVDDKWVQGCENDAGYAIWHWYLMDIFVYFSHSLVTLPPPCWTNTAHRHGVKVLGTFITEWNEGTATCKEMLATMESAQMYAGRLAELATALGFDG WLINIENEIDEEQIPNLKEFVSHLTKVLHISTPGSLVIWYDSVTIRGNLQWQDQLTELNKPFFDLCDGIFMNYTWKESYPELSAEVAGDRKFDVYMGIDV FGRGSFGGGQWTVNAALDLLKRHNLSAAMFAPGWVYETAQPPNFHTAQNKWWSLVEKSWGIVQTYPHVLPFYSDFNQGFGYH |
Full Sequence |
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Protein Sequence Length: 711 Download |
MRDLLRAYFS RRTLVSLYNL FFAISRKLLT SFPLSFLMPN SNDAVAESDA VPLLDLSKPS 60 LPISFPIKTL QDLKSRSYFD SFHFQFNRST VPLRRNSDGL QNRPRVLVCH DMKGGYVDDK 120 WVQGCENDAG YAIWHWYLMD IFVYFSHSLV TLPPPCWTNT AHRHGVKVLG TFITEWNEGT 180 ATCKEMLATM ESAQMYAGRL AELATALGFD GWLINIENEI DEEQIPNLKE FVSHLTKVLH 240 ISTPGSLVIW YDSVTIRGNL QWQDQLTELN KPFFDLCDGI FMNYTWKESY PELSAEVAGD 300 RKFDVYMGID VFGRGSFGGG QWTVNAALDL LKRHNLSAAM FAPGWVYETA QPPNFHTAQN 360 KWWSLVEKSW GIVQTYPHVL PFYSDFNQGF GYHVSLEGRQ LSDAPWYNIS CQSLQPLLEF 420 SEDNKDIIQV TVDAREASFN GGGNITFRGK LKEDAYFTTR LFKPHIQLSS SPITVSYSVK 480 SDETSKLGIL LSFSSPSQET KSILVAPQEP IRRFDNMFLQ CLTTSAQTVS EWTVHEMDLV 540 MDGHTLTEIS AFCYRPENST KRSEYVALLG HISIKDHVQY QQKPETLLPA SPWVIEAHNI 600 ELLPSNSGSK ILKLKLEWRQ KDLEDSVFPR YNLYAEKVKS TDVRPRKVLE KASSETVFLG 660 VAHVPAYYVA ELVVESEVKG VRFVVQTCGK DGSWDKLDDS PTLLVVLEGL * 720 |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
COG4724 | COG4724 | 2.0e-34 | 86 | 576 | 536 | + Endo-beta-N-acetylglucosaminidase D [Carbohydrate transport and metabolism] |
pfam03644 | Glyco_hydro_85 | 1.0e-116 | 112 | 393 | 301 | + Glycosyl hydrolase family 85. Family of endo-beta-N-acetylglucosaminidases. These enzymes work on a broad spectrum of substrates. |
cd06547 | GH85_ENGase | 9.0e-137 | 107 | 426 | 340 | + Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins. The beta-1,4-glycosyl bond located between two N-acetylglucosamine residues is hydrolyzed such that N-acetylglucosamine 1 remains with the protein and N-acetylglucosamine 2 forms the reducing end of the released glycan. ENGase is a key enzyme in the processing of free oligosaccharides in the cytosol of eukaryotes. Oligosaccharides formed in the lumen of the endoplasmic reticulum are transported into the cytosol where they are catabolized by cytosolic ENGases and other enzymes, possibly to maximize the reutilization of the component sugars. ENGases have an eight-stranded alpha/beta barrel topology and are classified as a family 85 glycosyl hydrolase (GH85) domain. The GH85 ENGases are sequence-similar to the family 18 glycosyl hydrolases, also known as GH18 chitinases. An ENGase-like protein is also found in bacteria and is included in this alignment model. |
Gene Ontology | |
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GO Term | Description |
GO:0005737 | cytoplasm |
GO:0033925 | mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB09989.1 | 0 | 57 | 708 | 16 | 619 | unnamed protein product [Arabidopsis thaliana] |
RefSeq | NP_187715.1 | 0 | 38 | 710 | 1 | 696 | glycosyl hydrolase family 85 protein [Arabidopsis thaliana] |
RefSeq | NP_196165.3 | 0 | 57 | 708 | 16 | 668 | hydrolase, acting on glycosyl bonds / mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [Arabidopsis thaliana] |
RefSeq | XP_002273683.1 | 0 | 46 | 709 | 8 | 689 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002520784.1 | 0 | 38 | 709 | 1 | 686 | endo beta n-acetylglucosaminidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3fhq_F | 2e-29 | 135 | 489 | 83 | 460 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
PDB | 3fhq_D | 2e-29 | 135 | 489 | 83 | 460 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
PDB | 3fhq_B | 2e-29 | 135 | 489 | 83 | 460 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
PDB | 3fhq_A | 2e-29 | 135 | 489 | 83 | 460 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
PDB | 3fha_D | 2e-29 | 135 | 489 | 83 | 460 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EV160308 | 245 | 154 | 398 | 0 |
EY940981 | 263 | 315 | 577 | 0 |
EL437937 | 257 | 131 | 387 | 0 |
EV118225 | 237 | 140 | 376 | 0 |
GE541456 | 265 | 228 | 491 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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