CAZyme Information

Basic Information
SpeciesCapsella rubella
Cazyme IDCarubv10013078m
FamilyGH85
Protein PropertiesLength: 711 Molecular Weight: 80698.8 Isoelectric Point: 5.9241
ChromosomeChromosome/Scaffold: 3 Start: 3530732 End: 3534259
DescriptionGlycosyl hydrolase family 85
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH851123930
  MKGGYVDDKWVQGCENDAGYAIWHWYLMDIFVYFSHSLVTLPPPCWTNTAHRHGVKVLGTFITEWNEGTATCKEMLATMESAQMYAGRLAELATALGFDG
  WLINIENEIDEEQIPNLKEFVSHLTKVLHISTPGSLVIWYDSVTIRGNLQWQDQLTELNKPFFDLCDGIFMNYTWKESYPELSAEVAGDRKFDVYMGIDV
  FGRGSFGGGQWTVNAALDLLKRHNLSAAMFAPGWVYETAQPPNFHTAQNKWWSLVEKSWGIVQTYPHVLPFYSDFNQGFGYH
Full Sequence
Protein Sequence     Length: 711     Download
MRDLLRAYFS RRTLVSLYNL FFAISRKLLT SFPLSFLMPN SNDAVAESDA VPLLDLSKPS    60
LPISFPIKTL QDLKSRSYFD SFHFQFNRST VPLRRNSDGL QNRPRVLVCH DMKGGYVDDK    120
WVQGCENDAG YAIWHWYLMD IFVYFSHSLV TLPPPCWTNT AHRHGVKVLG TFITEWNEGT    180
ATCKEMLATM ESAQMYAGRL AELATALGFD GWLINIENEI DEEQIPNLKE FVSHLTKVLH    240
ISTPGSLVIW YDSVTIRGNL QWQDQLTELN KPFFDLCDGI FMNYTWKESY PELSAEVAGD    300
RKFDVYMGID VFGRGSFGGG QWTVNAALDL LKRHNLSAAM FAPGWVYETA QPPNFHTAQN    360
KWWSLVEKSW GIVQTYPHVL PFYSDFNQGF GYHVSLEGRQ LSDAPWYNIS CQSLQPLLEF    420
SEDNKDIIQV TVDAREASFN GGGNITFRGK LKEDAYFTTR LFKPHIQLSS SPITVSYSVK    480
SDETSKLGIL LSFSSPSQET KSILVAPQEP IRRFDNMFLQ CLTTSAQTVS EWTVHEMDLV    540
MDGHTLTEIS AFCYRPENST KRSEYVALLG HISIKDHVQY QQKPETLLPA SPWVIEAHNI    600
ELLPSNSGSK ILKLKLEWRQ KDLEDSVFPR YNLYAEKVKS TDVRPRKVLE KASSETVFLG    660
VAHVPAYYVA ELVVESEVKG VRFVVQTCGK DGSWDKLDDS PTLLVVLEGL *             720
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
COG4724COG47242.0e-3486576536+
pfam03644Glyco_hydro_851.0e-116112393301+
cd06547GH85_ENGase9.0e-137107426340+
Gene Ontology
GO TermDescription
GO:0005737cytoplasm
GO:0033925mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
DDBJBAB09989.105770816619unnamed protein product [Arabidopsis thaliana]
RefSeqNP_187715.10387101696glycosyl hydrolase family 85 protein [Arabidopsis thaliana]
RefSeqNP_196165.305770816668hydrolase, acting on glycosyl bonds / mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [Arabidopsis thaliana]
RefSeqXP_002273683.10467098689PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002520784.10387091686endo beta n-acetylglucosaminidase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3fhq_F2e-2913548983460A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fhq_D2e-2913548983460A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fhq_B2e-2913548983460A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fhq_A2e-2913548983460A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fha_D2e-2913548983460A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EV1603082451543980
EY9409812633155770
EL4379372571313870
EV1182252371403760
GE5414562652284910
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00225.1
Arabidopsis lyrata497439.76.201497439.76.201872478497439.204.302487338
497439.204.302
Arabidopsis thalianaAT5G05460.1AT3G11040.1
Brachypodium distachyonBradi1g14127.1
Brassica rapaBra034160Bra005854
Carica papayaevm.model.supercontig_19.130
Capsella rubellaCarubv10000369m
Chlamydomonas reinhardtiiCre13.g582250.t1.2
Citrus clementinaCiclev10031026m.70.259Ciclev10031026m.70.259Ciclev10030777m
Cucumis sativusCucsa.144380.1Cucsa.144370.1
Eucalyptus grandisEucgr.J00174.1
Fragaria vescamrna21040.1-v1.0-hybrid
Glycine maxGlyma14g06120.2Glyma18g40011.1Glyma02g43025.1Glyma11g35630.1Glyma14g06130.1
Glyma14g06120.1Glyma18g02770.1Glyma02g43020.2
Gossypium raimondiiGorai.012G079500.1Gorai.011G290600.1
Linum usitatissimumLus10017430Lus10007526
Manihot esculentacassava4.1_029708mcassava4.1_031267m
Medicago truncatulaMedtr3g071610.1
Mimulus guttatusmgv1a002327mmgv1a001722m
Oryza sativaLOC_Os05g27960.1
Physcomitrella patensPp1s13_33V6.2Pp1s13_33V6.1
Phaseolus vulgarisPhvul.001G245900.1
Picea abiesMA_10436931g0010MA_10435721g0010
Populus trichocarpaPotri.008G073000.1Potri.010G184300.1Potri.010G184300.2Potri.010G184200.1Potri.010G184200.2
Prunus persicappa015834m
Ricinus communis29729.m00228229729.m002279
Setaria italicaSi021368m
Selaginella moellendorffii61572
Sorghum bicolorSb09g016230.1
Thellungiella halophilaThhalv10012879mThhalv10020200m
Vitis viniferaGSVIVT01032751001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny