| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10013222m |
| Family | GT31 |
| Protein Properties | Length: 624 Molecular Weight: 71016.7 Isoelectric Point: 7.3746 |
| Chromosome | Chromosome/Scaffold: 3 Start: 2002457 End: 2005355 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 389 | 574 | 0 |
| KRRMALRRSWMQYEAVRFGKVAVRFLIGLHTNEKVNIEMWKEAKAYGDIQFMPFVDYYGLLSLKTVALCILGTKVIPAKYIMKTDDDAFVRIDELLSSLK EKPSSALLYGLISFASSPDREQRSKWFIRKEEWPLESYPPWAHGPGYIISHDIAKFVVKGHRQRDLRLFKLEDVAMGIWIQQFNQT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 624 Download |
| MMQVLSVVRF KFGFTSVRMR NWSVGICIMV LTLIFIIRYE QPDHKLATNH TMDDSSIEGE 60 SVEEPAKKPH FMTLEDLDYL FSNMSISGGE EEEVLNGLLV WSRMRPFLER PDALPGTAQG 120 IEEATLAMKD LVFLISKEKG ASSDLVSKEL GRNCPDFVTA YDGDLSGLRH VLELPCGLIE 180 DSSITLVGIP DEKSRRFQIQ LVGSGLSGET RRPIILRYNV NFSNPSIVQN TWTEKLGWGN 240 EVRCPYHGSF KNHLVDELPL CNKQTGRITL EESSNDKENM DSSLSNSNFP FLKGSPFTAT 300 LWFGVEGFHM TINGQHETSF AYREKFEPWL VSAVKVSGDL KMLSALATRL PIPDDHASLT 360 VEENLKAPSL SGTRIELLVG VFSTGNNFKR RMALRRSWMQ YEAVRFGKVA VRFLIGLHTN 420 EKVNIEMWKE AKAYGDIQFM PFVDYYGLLS LKTVALCILG TKVIPAKYIM KTDDDAFVRI 480 DELLSSLKEK PSSALLYGLI SFASSPDREQ RSKWFIRKEE WPLESYPPWA HGPGYIISHD 540 IAKFVVKGHR QRDLRLFKLE DVAMGIWIQQ FNQTIKRVKY INDKRFHNSG CKSSYILVHY 600 QTPRLILCLW ENLQKEKQSI CCE* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00908 | Gal-bind_lectin | 3.0e-20 | 175 | 344 | 170 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| pfam00337 | Gal-bind_lectin | 1.0e-23 | 171 | 344 | 174 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| cd00070 | GLECT | 4.0e-24 | 170 | 344 | 175 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam01762 | Galactosyl_T | 2.0e-27 | 389 | 567 | 186 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03133 | PLN03133 | 0 | 19 | 622 | 642 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF08572.1 | 0 | 29 | 623 | 1 | 562 | AC011623_5 unknown protein [Arabidopsis thaliana] |
| GenBank | AAQ77230.1 | 0 | 1 | 554 | 1 | 550 | putative beta 1, 3 galactosyltransferase-like protein [Arabidopsis thaliana] |
| GenBank | AAQ77231.1 | 0 | 1 | 623 | 1 | 619 | putative beta 1, 3 galactosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_001078115.1 | 0 | 1 | 554 | 1 | 550 | galactosyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | NP_566284.1 | 0 | 1 | 623 | 1 | 619 | galactosyltransferase family protein [Arabidopsis thaliana] |
