| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10013225m |
| Family | GH1 |
| Protein Properties | Length: 624 Molecular Weight: 70641.4 Isoelectric Point: 9.1675 |
| Chromosome | Chromosome/Scaffold: 3 Start: 2043841 End: 2047692 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH1 | 139 | 512 | 0 |
| VAAWHNAPHAEERLKFWSDPDKEVKLAKDTGVTVFRMGIDWSRIMPVEPTEGIKEAVNYEALEHYKWILGRVRSNGMKVMLTLFHHSLPPWAADYGGWKI EKTVDYFMEFTRLVVDSMFDLVDSWVTFNEPHVFTMLTYMCGSWPGNNPDFLEMATSTLPMGVFHRALHWMAVAHSKAYDYIHGKISLKKPLVGVAHHVS FMRPYGLFDIGAVTITNSLTMFPYIDSISEKLDFIGINYYGQEVVCGAGLKLVETDEYSESGRGVYPDGLYRVLLMFHEKYKHLKVPFIITENGVSDETD VIRRPYLIEHLLAVYAAMLKGVPVLGYVFWTISDNWEWADGYGPKFGLVAVDRSHNLARTLRPSYHLFSKIVKS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 624 Download |
| MELVALLVKV AGLLASITVG ANAYSYSRFR RQSLAKFRSP IDESKEVLAD FNSIEHKDGK 60 FFFGLATAPA HAEDDLDDAW LQFAKETPCS EADAEAAADN KVKRKKVKLA VGAITKGLEK 120 NKNGKEDKTS ADKSPVKNVA AWHNAPHAEE RLKFWSDPDK EVKLAKDTGV TVFRMGIDWS 180 RIMPVEPTEG IKEAVNYEAL EHYKWILGRV RSNGMKVMLT LFHHSLPPWA ADYGGWKIEK 240 TVDYFMEFTR LVVDSMFDLV DSWVTFNEPH VFTMLTYMCG SWPGNNPDFL EMATSTLPMG 300 VFHRALHWMA VAHSKAYDYI HGKISLKKPL VGVAHHVSFM RPYGLFDIGA VTITNSLTMF 360 PYIDSISEKL DFIGINYYGQ EVVCGAGLKL VETDEYSESG RGVYPDGLYR VLLMFHEKYK 420 HLKVPFIITE NGVSDETDVI RRPYLIEHLL AVYAAMLKGV PVLGYVFWTI SDNWEWADGY 480 GPKFGLVAVD RSHNLARTLR PSYHLFSKIV KSGKVTRKDR SLAWNELQKA AKAGKIRPFY 540 RAVNNNGLMY ADGLDKPQWR PIVDRDWRFG HYQVDGLQDP LSRVARTLLI WPLIMKKRIR 600 KVKIKHTDDA GLVLHPALAS PFD* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR01233 | lacG | 9.0e-22 | 131 | 490 | 429 | + 6-phospho-beta-galactosidase. This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PRK13511 | PRK13511 | 3.0e-23 | 161 | 490 | 416 | + 6-phospho-beta-galactosidase; Provisional | ||
| TIGR03356 | BGL | 5.0e-51 | 162 | 506 | 388 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 3.0e-52 | 159 | 512 | 410 | + Glycosyl hydrolase family 1. | ||
| COG2723 | BglB | 2.0e-62 | 162 | 513 | 408 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG51335.1 | 0 | 1 | 623 | 1 | 618 | AC020580_15 beta-glucosidase, putative; 69917-66834 [Arabidopsis thaliana] |
| GenBank | AAM65250.1 | 0 | 1 | 623 | 1 | 622 | beta-glucosidase, putative [Arabidopsis thaliana] |
| EMBL | CAD36513.1 | 0 | 1 | 623 | 1 | 622 | mutant putative beta-glycosidase [Arabidopsis thaliana] |
| RefSeq | NP_001118591.1 | 0 | 1 | 623 | 1 | 656 | SFR2 (SENSITIVE TO FREEZING 2); beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_566285.1 | 0 | 1 | 623 | 1 | 622 | SFR2 (SENSITIVE TO FREEZING 2); beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4ha4_A | 2.94273e-44 | 154 | 516 | 59 | 469 | A Chain A, Crystal Structure Of The Lambda Repressor |
| PDB | 4ha3_A | 2.94273e-44 | 154 | 516 | 59 | 469 | A Chain A, Structure Of Beta-Glycosidase From Acidilobus Saccharovorans In Complex With Tris |
| PDB | 1qvb_B | 9.99967e-42 | 154 | 509 | 58 | 464 | A Chain A, Crystal Structure Of The Beta-Glycosidase From The Hyperthermophile Thermosphaera Aggregans |
| PDB | 1qvb_A | 9.99967e-42 | 154 | 509 | 58 | 464 | A Chain A, Crystal Structure Of The Beta-Glycosidase From The Hyperthermophile Thermosphaera Aggregans |
| PDB | 3apg_D | 9.99995e-41 | 154 | 523 | 58 | 465 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
