| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10013330m |
| Family | GH47 |
| Protein Properties | Length: 575 Molecular Weight: 65315.1 Isoelectric Point: 6.2186 |
| Chromosome | Chromosome/Scaffold: 3 Start: 7597842 End: 7602652 |
| Description | alpha-mannosidase 2 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH47 | 107 | 539 | 0 |
| AMIHAWSSYETYAWGQDELQPQTKDGVDSFGGLGATMIDALDTLYIMGLDEQFQKARDWVASSLDFDKDYAASMFETTIRVVGGLLSAYDLSGDKIFLEK ATDIADRLLPAWDTKSGIPYNIINLRHGNAHNPTWAGGDSILADSGTEQLEFIALSQRTGDPKYQQKVEKVISVLNKDFPDDGLLPIYINPDTAKPSYST TTFGAMGDSFYEYLLKVWVFGNKTSAVKHYRDMWEKSMNGLLSLVKKSSPSSFTYICEKSGNSLIDKMDELACFAPGMLALGASGYSDPAEGKKFLTLAE ELAWTCYNFYQSTPTKLAGENYFFNSGNDMNVGTSWNILRPETVESLFYLWRLTGNKTYQEWGWNIFEAFEKNSRIESGYVGLKDVNTGVKDNKMQSFFL AETLKYLYLLFSPTTVISLDEWVFNTEAHPLKI | |||
| Full Sequence |
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| Protein Sequence Length: 575 Download |
| MARNKLVSGG GSHGIWKYFN PAFYLRRPRR LALLIILFVS VSMVVWDRQS LSRDYQVEVS 60 KLNEEVVRLQ QMLEEMKSVT EDMSVKSLND VQEDPVDAQR MQRVKEAMIH AWSSYETYAW 120 GQDELQPQTK DGVDSFGGLG ATMIDALDTL YIMGLDEQFQ KARDWVASSL DFDKDYAASM 180 FETTIRVVGG LLSAYDLSGD KIFLEKATDI ADRLLPAWDT KSGIPYNIIN LRHGNAHNPT 240 WAGGDSILAD SGTEQLEFIA LSQRTGDPKY QQKVEKVISV LNKDFPDDGL LPIYINPDTA 300 KPSYSTTTFG AMGDSFYEYL LKVWVFGNKT SAVKHYRDMW EKSMNGLLSL VKKSSPSSFT 360 YICEKSGNSL IDKMDELACF APGMLALGAS GYSDPAEGKK FLTLAEELAW TCYNFYQSTP 420 TKLAGENYFF NSGNDMNVGT SWNILRPETV ESLFYLWRLT GNKTYQEWGW NIFEAFEKNS 480 RIESGYVGLK DVNTGVKDNK MQSFFLAETL KYLYLLFSPT TVISLDEWVF NTEAHPLKIN 540 SRKYPVNRNQ SNSVLQRKPA FRIRQRHYGR ITKK* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01532 | Glyco_hydro_47 | 0 | 107 | 539 | 452 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| PTZ00470 | PTZ00470 | 0 | 92 | 539 | 458 | + glycoside hydrolase family 47 protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK92711.1 | 0 | 1 | 574 | 1 | 572 | putative mannosidase [Arabidopsis thaliana] |
| DDBJ | BAB01459.1 | 0 | 1 | 574 | 1 | 581 | alpha 1,2-mannosidase-like protein [Arabidopsis thaliana] |
| EMBL | CBI18472.1 | 0 | 16 | 570 | 11 | 571 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_175570.1 | 0 | 1 | 570 | 1 | 556 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
| RefSeq | NP_566675.1 | 0 | 1 | 574 | 1 | 572 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nxc_A | 0 | 94 | 554 | 11 | 473 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 1fmi_A | 0 | 100 | 539 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo3_A | 0 | 100 | 539 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo2_A | 0 | 100 | 539 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1x9d_A | 0 | 100 | 539 | 88 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO780776 | 498 | 39 | 506 | 0 |
| CU615093 | 328 | 247 | 571 | 0 |
| EX117709 | 297 | 125 | 420 | 0 |
| DY974119 | 308 | 168 | 475 | 0 |
| HO780776 | 78 | 497 | 570 | 0.000000000000006 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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