Basic Information | |
---|---|
Species | Capsella rubella |
Cazyme ID | Carubv10013399m |
Family | CE8 |
Protein Properties | Length: 545 Molecular Weight: 60652 Isoelectric Point: 9.2166 |
Chromosome | Chromosome/Scaffold: 3 Start: 1661072 End: 1663291 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 242 | 527 | 0 |
TVVSLDGKGKYRTINEAINEAPNHSTKRYIIYVKKGVYKENIDLKKKKTNIMLVGDGIGQTIITGNLNFMQGLTTFRTATVAVSGRGFIAKDITFRNTAG PQNRQAVALRVDSDQSAFYRCSVEGYQDTLYAHSLRQFYRDCEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPNQNTGFVIQNSYVLA TQPTYLGRPWKLYSRTVYMNTYMSQLVQPRGWLEWFGNFALDTLWYGEYNNIGPGWRSSGRVKWPGYHIMDKRTALSFTVGSFIDG |
Full Sequence |
---|
Protein Sequence Length: 545 Download |
MGINGFLTAL LLAMLIFVHT SSSETTIFKP YKEENFQSLV AKACQFIYAH ESCVSNIRTH 60 IKESGHGLNP HSVLSAAVKE AHDKAKLAME RIPTVTTLSI RSREQIAIED CKELVGFSVT 120 ELAWSMLEMN KLHGGGGIDG GSHDAAAAGG NLKTWLSAAM SNQDTCLEGF EGTERKYEEL 180 IKGTLRQVTQ LVSNVLDMYT QLNALPFKAS RNESFTASPE WLTETDESLM MRHDPSGKHS 240 NTVVSLDGKG KYRTINEAIN EAPNHSTKRY IIYVKKGVYK ENIDLKKKKT NIMLVGDGIG 300 QTIITGNLNF MQGLTTFRTA TVAVSGRGFI AKDITFRNTA GPQNRQAVAL RVDSDQSAFY 360 RCSVEGYQDT LYAHSLRQFY RDCEIYGTID FIFGNGAAVL QNCKIYTRVP LPLQKVTITA 420 QGRKSPNQNT GFVIQNSYVL ATQPTYLGRP WKLYSRTVYM NTYMSQLVQP RGWLEWFGNF 480 ALDTLWYGEY NNIGPGWRSS GRVKWPGYHI MDKRTALSFT VGSFIDGQRW LPATGVTFTA 540 GLAN* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 9.0e-162 | 11 | 542 | 549 | + pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 9.0e-163 | 94 | 543 | 474 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02506 | PLN02506 | 0 | 5 | 544 | 545 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 241 | 527 | 297 | + Pectinesterase. | ||
PLN02201 | PLN02201 | 0 | 70 | 543 | 492 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_187213.1 | 0 | 5 | 544 | 2 | 543 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002279144.1 | 0 | 19 | 544 | 56 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318977.1 | 0 | 7 | 544 | 3 | 539 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330224.1 | 0 | 42 | 544 | 2 | 502 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512462.1 | 0 | 37 | 544 | 32 | 535 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 241 | 542 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 240 | 542 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 2e-23 | 241 | 496 | 32 | 334 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 2e-23 | 241 | 496 | 5 | 310 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-23 | 241 | 496 | 5 | 310 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |