| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10013637m |
| Family | GT28 |
| Protein Properties | Length: 467 Molecular Weight: 53150.3 Isoelectric Point: 8.2666 |
| Chromosome | Chromosome/Scaffold: 3 Start: 11139393 End: 11142734 |
| Description | monogalactosyldiacylglycerol synthase type C |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT28 | 281 | 439 | 2.2e-33 |
| VLLMGGGEGMGPVQKTAKALGDSLYNSKERKPIGQLIVICGRNKVLASTLASHEWKIPFKVRGFETQMEKWMGACDCIITKAGPGTIAEALICGLPIILN DYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVADWFSSNKDELKSMSENALKLAQPEA | |||
| Full Sequence |
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| Protein Sequence Length: 467 Download |
| MMQVASPRTR SDSLTEKVFR RVYSNFNIST VEDDYIVHSR RSSDYEKERL RKKGFEDKEE 60 VMEMEQMGAE RIKTVLILMS DTGGGHRASA EAIRDAFKIE FGDDYRIIIK DVWKEYTGWP 120 LNDMERQYKF MVKHVGLWSV AFHGTSPKWI HKSYLSALAA YYAKEIETGL MEYKPDIIIS 180 VHPLMQHIPL WVMKRQELQK KVIFVTVITD LNTCHRTWFH HGVSRCYCPS KEVAKRALVD 240 GLDDSQIRVF GLPVRPSFPR TIINKDELRR ELEIDLPLPA VLLMGGGEGM GPVQKTAKAL 300 GDSLYNSKER KPIGQLIVIC GRNKVLASTL ASHEWKIPFK VRGFETQMEK WMGACDCIIT 360 KAGPGTIAEA LICGLPIILN DYIPGQEKGN VPYVVDNGAG VFTRSPKETA RIVADWFSSN 420 KDELKSMSEN ALKLAQPEAV FDIVKDIHHL SEQQQQRIPV FSDFSY* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0707 | MurG | 1.0e-25 | 170 | 445 | 289 | + UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
| PRK13608 | PRK13608 | 1.0e-33 | 170 | 464 | 308 | + diacylglycerol glucosyltransferase; Provisional | ||
| PRK13609 | PRK13609 | 8.0e-43 | 71 | 462 | 402 | + diacylglycerol glucosyltransferase; Provisional | ||
| pfam06925 | MGDG_synth | 5.0e-69 | 86 | 254 | 169 | + Monogalactosyldiacylglycerol (MGDG) synthase. This family represents a conserved region of approximately 180 residues within plant and bacterial monogalactosyldiacylglycerol (MGDG) synthase (EC:2.4.1.46). In Arabidopsis, there are two types of MGDG synthase which differ in their N-terminal portion: type A and type B. | ||
| PLN02605 | PLN02605 | 0 | 75 | 454 | 382 | + monogalactosyldiacylglycerol synthase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009058 | biosynthetic process |
| GO:0009247 | glycolipid biosynthetic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001118301.1 | 0 | 1 | 361 | 1 | 361 | MGDC; 1,2-diacylglycerol 3-beta-galactosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_565352.1 | 0 | 1 | 466 | 1 | 465 | MGDC; 1,2-diacylglycerol 3-beta-galactosyltransferase [Arabidopsis thaliana] |
| RefSeq | XP_002263443.1 | 0 | 2 | 454 | 3 | 435 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002331019.1 | 0 | 62 | 454 | 1 | 393 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530758.1 | 0 | 1 | 454 | 2 | 452 | 1,2-diacylglycerol 3-beta-galactosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2u_A | 0.009 | 344 | 444 | 242 | 348 | A Chain A, Crystal Structure Of The Pseudomonas Aeruginosa Murg:udp-glcnac Substrate Comp |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO466477 | 384 | 73 | 456 | 0 |
| EX529759 | 308 | 125 | 432 | 0 |
| GO845052 | 296 | 170 | 465 | 0 |
| DT339279 | 296 | 133 | 428 | 0 |
| HO604323 | 389 | 73 | 450 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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