CAZyme Information

Basic Information
SpeciesCapsella rubella
Cazyme IDCarubv10013700m
FamilyGT65
Protein PropertiesLength: 447 Molecular Weight: 50742.4 Isoelectric Point: 9.1528
ChromosomeChromosome/Scaffold: 3 Start: 1549729 End: 1552305
DescriptionO-fucosyltransferase family protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT65783900
  GLNNQKIAFARACLTARLMNRTLLMPSLSASLFYKEVDKLRPIPFDQVFQFERFNSLCSGFVRLSRFPDVRNRAQVFDLEKGSGRRWTVERDMEQLKHSS
  RNESIDEFEVIRVIGKNPFLWHDHWPVEDYAKVFECMVVVDEISREADKVVMKIREAGEAERAKLGSKTETLPGPIPFVAVHMRIEIDWMIHCKKLEQRQ
  KVSEICSSKREIMERVGNISSLKTPTVLYLAVADTLLEEKEEDSSVLRGWRDGLIPFEKKKLGVKEEIYGKYSYLIQSAIDYEVCLRADVFVGNSFSTFS
  SLIVLERTQKARK
Full Sequence
Protein Sequence     Length: 447     Download
MNSPLSSKNL RLFTNSVAFK CLLLVGIALF YRALLLSYTS RNALSGGSLV PARHMSDSSS    60
TNGIRTDKFL EVPQIVWGLN NQKIAFARAC LTARLMNRTL LMPSLSASLF YKEVDKLRPI    120
PFDQVFQFER FNSLCSGFVR LSRFPDVRNR AQVFDLEKGS GRRWTVERDM EQLKHSSRNE    180
SIDEFEVIRV IGKNPFLWHD HWPVEDYAKV FECMVVVDEI SREADKVVMK IREAGEAERA    240
KLGSKTETLP GPIPFVAVHM RIEIDWMIHC KKLEQRQKVS EICSSKREIM ERVGNISSLK    300
TPTVLYLAVA DTLLEEKEED SSVLRGWRDG LIPFEKKKLG VKEEIYGKYS YLIQSAIDYE    360
VCLRADVFVG NSFSTFSSLI VLERTQKARK LGVMSSCDDG ENKWRSYAYN LAGESKGVPR    420
RWMTNMTHSS LQAISYGSNS VSCSSG* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd11302O-FucT-10.001218389195+
cd11296O-FucT_like9.0e-56915486+
cd11299O-FucT_plant4.0e-1278385336+
cd11296O-FucT_like2.0e-23200385187+
pfam10250O-FucT2.0e-4878389343+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAN72045.10954461351unknown protein [Arabidopsis thaliana]
RefSeqNP_187183.3014461445unknown protein [Arabidopsis thaliana]
RefSeqXP_002273827.10174431427PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002332132.10954431347predicted protein [Populus trichocarpa]
RefSeqXP_002531235.104944355446conserved hypothetical protein [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3zy6_A0.00002254389212349A Chain A, Crystal Structure Of Mouse TestisBRAIN RNA-Binding Protein (Tb-Rbp)
PDB3zy5_A0.00002254389212349A Chain A, Crystal Structure Of Mouse TestisBRAIN RNA-Binding Protein (Tb-Rbp)
PDB3zy4_A0.00002254389212349A Chain A, Crystal Structure Of Mouse TestisBRAIN RNA-Binding Protein (Tb-Rbp)
PDB3zy3_B0.00002254389212349A Chain A, Crystal Structure Of Mouse TestisBRAIN RNA-Binding Protein (Tb-Rbp)
PDB3zy3_A0.00002254389212349A Chain A, Crystal Structure Of Mouse TestisBRAIN RNA-Binding Protein (Tb-Rbp)
Transmembrane Domains
StartEnd
1234
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EX7768972431934340
EE465432255102630
DW5174702671764340
FD5479482172194340
DW5173972601764270
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_035_00086.1
Arabidopsis lyrata477820
Arabidopsis thalianaAT3G05320.1
Brachypodium distachyonBradi3g05130.1
Brassica rapaBra040646.99.283Bra040646.99.283
Capsella rubellaCarubv10013656m
Citrus clementinaCiclev10015216m
Citrus sinensisorange1.1g013043m
Cucumis sativusCucsa.236440.1
Eucalyptus grandisEucgr.H03600.1
Fragaria vescamrna20066.1-v1.0-hybrid
Glycine maxGlyma07g34965.1.189.378Glyma07g34965.1.189.378Glyma07g34965.2.189.378Glyma15g13250.1Glyma20g02800.2
Glyma20g02800.3Glyma09g02350.2Glyma07g34965.2.189.378Glyma09g02350.3Glyma07g34965.3.189.378
Glyma07g34965.3.189.378Glyma07g34965.1.70.189Glyma07g34965.1.70.189Glyma07g34965.2.70.189Glyma07g34965.2.70.189
Glyma07g34965.3.70.189Glyma07g34965.3.70.189
Gossypium raimondiiGorai.009G150500.1.203.398Gorai.011G050000.1Gorai.011G049800.1Gorai.010G169400.1Gorai.010G169400.2
Gorai.009G150500.1.84.201Gorai.009G150500.1.84.201Gorai.009G150500.1.203.398
Linum usitatissimumLus10018291Lus10040618
Malus domesticaMDP0000794968.202.395MDP0000218405.202.395MDP0000218405.202.395MDP0000794968.202.395MDP0000218405.83.200
MDP0000218405.83.200MDP0000794968.83.200MDP0000794968.83.200MDP0000292513
Manihot esculentacassava4.1_007711m
Medicago truncatulaMedtr4g083590.1Medtr2g028900.1
Mimulus guttatusmgv1a024556m.157.260mgv1a024556m.157.260mgv1a010727m
Oryza sativaLOC_Os02g07200.1LOC_Os02g07200.3LOC_Os02g07200.2
Panicum virgatumPavirv00064034mPavirv00047509m
Phaseolus vulgarisPhvul.006G131800.1.76.195Phvul.006G131600.2Phvul.006G131600.1Phvul.006G131800.1.76.195Phvul.006G131800.1.195.389
Phvul.006G131800.1.195.389
Picea abiesMA_458283g0010MA_730174g0010MA_10435476g0010
Populus trichocarpaPotri.015G117500.1Potri.012G118800.1
Prunus persicappa005601m
Ricinus communis30109.m000167
Setaria italicaSi020158m
Selaginella moellendorffii130392.157.337130392.157.337130392.42.158130392.42.158
Sorghum bicolorSb04g004590.1
Thellungiella halophilaThhalv10020752m.197.381Thhalv10020752m.197.381Thhalv10020752m.78.198Thhalv10020752m.78.198
Vitis viniferaGSVIVT01026258001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny