| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10013765m |
| Family | GT14 |
| Protein Properties | Length: 427 Molecular Weight: 48246.1 Isoelectric Point: 8.6215 |
| Chromosome | Chromosome/Scaffold: 3 Start: 9038412 End: 9040493 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 78 | 329 | 0 |
| IAYLISGSSGDSRRILRLLYATYHPRNRYLLHLDSLAVQSERDRLAVAVQDVAIFRAARNVDVIGKPDFVYQRGSSPMASTLHGASILLRLSGAWDWFVN LNVDDYPLVTQDELLHILSHLPKDLNFVNHTSYIGWKESRRLKPVIVDPGLYLVEKTDMFFASQKRELPKAFKLFSGPSFSILSRNFIEHCVLGIDNFPR TLLMYLSNTPDSLSNYFPTILCNSNPFKKTIINNNLLYVASNETTKERYHRL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 427 Download |
| MLCFTRRLEK MQNGPEQPRV TLYIILTTAF LTLCYLLSLF SSSHSSSSYT GRPEDLRPDP 60 RLFPSSSKIA ADTAPPSIAY LISGSSGDSR RILRLLYATY HPRNRYLLHL DSLAVQSERD 120 RLAVAVQDVA IFRAARNVDV IGKPDFVYQR GSSPMASTLH GASILLRLSG AWDWFVNLNV 180 DDYPLVTQDE LLHILSHLPK DLNFVNHTSY IGWKESRRLK PVIVDPGLYL VEKTDMFFAS 240 QKRELPKAFK LFSGPSFSIL SRNFIEHCVL GIDNFPRTLL MYLSNTPDSL SNYFPTILCN 300 SNPFKKTIIN NNLLYVASNE TTKERYHRLD PKEFTEMVET GAAFARGFRF DDPVLDRIDH 360 ELLGRRHGEV VPGGWCLGDS GKNSSSCSVW GDSGILRPGS GSDRLERRIV KLLSNDWFRS 420 HQCISE* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 6.0e-68 | 78 | 338 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 3.0e-121 | 60 | 423 | 364 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS99698.1 | 0 | 11 | 426 | 1 | 417 | At3g24040 [Arabidopsis thaliana] |
| DDBJ | BAD43851.1 | 0 | 155 | 426 | 1 | 272 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_189046.1 | 0 | 11 | 426 | 1 | 417 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | XP_002299292.1 | 0 | 22 | 426 | 24 | 428 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518166.1 | 0 | 57 | 426 | 65 | 438 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.00002 | 94 | 279 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.00002 | 94 | 279 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.00002 | 94 | 279 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.00002 | 94 | 279 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.00002 | 94 | 279 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
