y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10013884m |
Family | GH17 |
Protein Properties | Length: 398 Molecular Weight: 43807.4 Isoelectric Point: 9.3657 |
Chromosome | Chromosome/Scaffold: 3 Start: 5480725 End: 5482727 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 44 | 363 | 0 |
GINYGRIADNLPPPDAVARLLKSAKIRNIRIYDADHSVLTAFRGTGIEIIVGLGNEFLKDISVGEDRAMNWLKENVEPFIRGGTKISGIAVGNEILGGTD IGLWEALLPAAKNVYSALRRLGLHNVVEVSSPHSEAVFANSYPPSSCTFRDDVAPFMKPLLAFFGQIGSSFYINAYPFLAYKSDPITIELNYAIFEHNKG ILDPKTKLHYDNMFDAMVDASYAALEKAGYTKVPVIVSETGWASKGDADEPGASLKNARTYNRNLKKRLQKRKGTPYRPDMVVRAYVFALFNENSKPGPT SERNFGLFKPDGTIAYDIGF |
Full Sequence |
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Protein Sequence Length: 398 Download |
MDYCIYLRKS PTSHMGFSAF FLSFLLVFSI LSSQPAVAFI GTYGINYGRI ADNLPPPDAV 60 ARLLKSAKIR NIRIYDADHS VLTAFRGTGI EIIVGLGNEF LKDISVGEDR AMNWLKENVE 120 PFIRGGTKIS GIAVGNEILG GTDIGLWEAL LPAAKNVYSA LRRLGLHNVV EVSSPHSEAV 180 FANSYPPSSC TFRDDVAPFM KPLLAFFGQI GSSFYINAYP FLAYKSDPIT IELNYAIFEH 240 NKGILDPKTK LHYDNMFDAM VDASYAALEK AGYTKVPVIV SETGWASKGD ADEPGASLKN 300 ARTYNRNLKK RLQKRKGTPY RPDMVVRAYV FALFNENSKP GPTSERNFGL FKPDGTIAYD 360 IGFPGLKSSS STTRCRVWSS SLVSACLVMI LLLLLQR* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 1.0e-95 | 44 | 363 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB02311.1 | 0 | 27 | 386 | 19 | 376 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
EMBL | CBI36326.1 | 0 | 38 | 389 | 35 | 385 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_188201.1 | 0 | 1 | 385 | 1 | 383 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002299750.1 | 0 | 38 | 373 | 12 | 346 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327527.1 | 0 | 38 | 373 | 3 | 337 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 44 | 363 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 44 | 363 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 44 | 363 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 44 | 363 | 4 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 44 | 363 | 4 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |